JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	chapid	clen	total	AFR	AMR	EAS	EUR	SAS	cseq	genename	chr	start	end
MKI67_chr10_128091659_128131423	0/0	c0015	9771	4	0	0	4	0	0	copy fasta	MKI67	chr10	128091659	128131423
MKI67_chr10_128091659_128131423	0/0	c0016	9771	3	0	0	0	0	3	copy fasta	MKI67	chr10	128091659	128131423
MKI67_chr10_128091659_128131423	0/0	c0017	9777	3	2	1	0	0	0	copy fasta	MKI67	chr10	128091659	128131423
MKI67_chr10_128091659_128131423	0/0	c0018	9771	3	0	2	0	1	0	copy fasta	MKI67	chr10	128091659	128131423
MKI67_chr10_128091659_128131423	0/0	c0019	9771	2	2	0	0	0	0	copy fasta	MKI67	chr10	128091659	128131423
MKI67_chr10_128091659_128131423	0/0	c0020	9771	2	0	0	1	0	1	copy fasta	MKI67	chr10	128091659	128131423
MKI67_chr10_128091659_128131423	0/0	c0021	9771	2	2	0	0	0	0	copy fasta	MKI67	chr10	128091659	128131423
MKI67_chr10_128091659_128131423	0/0	c0022	9771	2	0	0	2	0	0	copy fasta	MKI67	chr10	128091659	128131423
MKI67_chr10_128091659_128131423	0/0	c0023	9771	2	0	0	2	0	0	copy fasta	MKI67	chr10	128091659	128131423
MKI67_chr10_128091659_128131423	0/0	c0024	9771	2	2	0	0	0	0	copy fasta	MKI67	chr10	128091659	128131423
MKI67_chr10_128091659_128131423	0/0	c0025	9771	2	0	0	0	0	2	copy fasta	MKI67	chr10	128091659	128131423
MKI67_chr10_128091659_128131423	0/0	c0026	9771	2	0	2	0	0	0	copy fasta	MKI67	chr10	128091659	128131423
MKI67_chr10_128091659_128131423	0/0	c0027	9771	2	2	0	0	0	0	copy fasta	MKI67	chr10	128091659	128131423
MKI67_chr10_128091659_128131423	1/0	c0028	9771	2	0	0	1	0	0	copy fasta	MKI67	chr10	128091659	128131423
MKI67_chr10_128091659_128131423	0/0	c0029	9771	2	1	0	0	1	0	copy fasta	MKI67	chr10	128091659	128131423
MKI67_chr10_128091659_128131423	0/0	c0030	9771	2	2	0	0	0	0	copy fasta	MKI67	chr10	128091659	128131423
MKI67_chr10_128091659_128131423	0/0	c0031	9771	2	2	0	0	0	0	copy fasta	MKI67	chr10	128091659	128131423
MKI67_chr10_128091659_128131423	0/0	c0032	9771	2	0	0	2	0	0	copy fasta	MKI67	chr10	128091659	128131423
MKI67_chr10_128091659_128131423	0/0	c0033	9771	2	2	0	0	0	0	copy fasta	MKI67	chr10	128091659	128131423
MKI67_chr10_128091659_128131423	0/0	c0034	9771	2	0	2	0	0	0	copy fasta	MKI67	chr10	128091659	128131423
MKI67_chr10_128091659_128131423	0/0	c0035	9771	2	0	0	2	0	0	copy fasta	MKI67	chr10	128091659	128131423
MKI67_chr10_128091659_128131423	0/0	c0036	9771	2	0	0	2	0	0	copy fasta	MKI67	chr10	128091659	128131423
MKI67_chr10_128091659_128131423	0/0	c0037	9771	2	0	0	2	0	0	copy fasta	MKI67	chr10	128091659	128131423
MKI67_chr10_128091659_128131423	0/0	c0038	9771	2	0	0	2	0	0	copy fasta	MKI67	chr10	128091659	128131423
MKI67_chr10_128091659_128131423	0/0	c0039	9771	2	0	0	2	0	0	copy fasta	MKI67	chr10	128091659	128131423
MKI67_chr10_128091659_128131423	0/0	c0040	9771	2	2	0	0	0	0	copy fasta	MKI67	chr10	128091659	128131423
MKI67_chr10_128091659_128131423	0/0	c0041	9771	2	0	2	0	0	0	copy fasta	MKI67	chr10	128091659	128131423
MKI67_chr10_128091659_128131423	0/0	c0042	9771	1	0	0	0	0	1	copy fasta	MKI67	chr10	128091659	128131423
MKI67_chr10_128091659_128131423	0/0	c0043	9771	1	1	0	0	0	0	copy fasta	MKI67	chr10	128091659	128131423
MKI67_chr10_128091659_128131423	0/0	c0044	9771	1	1	0	0	0	0	copy fasta	MKI67	chr10	128091659	128131423
MKI67_chr10_128091659_128131423	0/0	c0045	9771	1	1	0	0	0	0	copy fasta	MKI67	chr10	128091659	128131423
MKI67_chr10_128091659_128131423	0/0	c0046	9771	1	0	0	0	1	0	copy fasta	MKI67	chr10	128091659	128131423
MKI67_chr10_128091659_128131423	0/0	c0047	9771	1	1	0	0	0	0	copy fasta	MKI67	chr10	128091659	128131423
MKI67_chr10_128091659_128131423	0/0	c0048	9771	1	1	0	0	0	0	copy fasta	MKI67	chr10	128091659	128131423
MKI67_chr10_128091659_128131423	0/0	c0049	9771	1	1	0	0	0	0	copy fasta	MKI67	chr10	128091659	128131423
MKI67_chr10_128091659_128131423	0/0	c0050	9771	1	0	0	1	0	0	copy fasta	MKI67	chr10	128091659	128131423
MKI67_chr10_128091659_128131423	0/0	c0051	9771	1	0	0	1	0	0	copy fasta	MKI67	chr10	128091659	128131423
MKI67_chr10_128091659_128131423	0/0	c0052	9771	1	0	1	0	0	0	copy fasta	MKI67	chr10	128091659	128131423
MKI67_chr10_128091659_128131423	0/0	c0053	9771	1	0	0	1	0	0	copy fasta	MKI67	chr10	128091659	128131423
MKI67_chr10_128091659_128131423	0/0	c0054	9771	1	1	0	0	0	0	copy fasta	MKI67	chr10	128091659	128131423
MKI67_chr10_128091659_128131423	0/0	c0055	9771	1	1	0	0	0	0	copy fasta	MKI67	chr10	128091659	128131423
MKI67_chr10_128091659_128131423	0/0	c0056	9771	1	0	0	0	0	1	copy fasta	MKI67	chr10	128091659	128131423
MKI67_chr10_128091659_128131423	0/0	c0057	9771	1	0	1	0	0	0	copy fasta	MKI67	chr10	128091659	128131423
MKI67_chr10_128091659_128131423	0/0	c0058	9771	1	0	1	0	0	0	copy fasta	MKI67	chr10	128091659	128131423
MKI67_chr10_128091659_128131423	0/0	c0059	9771	1	0	1	0	0	0	copy fasta	MKI67	chr10	128091659	128131423
MKI67_chr10_128091659_128131423	0/0	c0060	9771	1	0	0	0	1	0	copy fasta	MKI67	chr10	128091659	128131423
MKI67_chr10_128091659_128131423	0/0	c0061	9771	1	0	0	1	0	0	copy fasta	MKI67	chr10	128091659	128131423
MKI67_chr10_128091659_128131423	0/0	c0062	9771	1	0	0	1	0	0	copy fasta	MKI67	chr10	128091659	128131423
MKI67_chr10_128091659_128131423	0/0	c0063	9771	1	0	0	1	0	0	copy fasta	MKI67	chr10	128091659	128131423
MKI67_chr10_128091659_128131423	0/0	c0064	9771	1	0	0	1	0	0	copy fasta	MKI67	chr10	128091659	128131423