JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	chapid	clen	total	AFR	AMR	EAS	EUR	SAS	cseq	genename	chr	start	end
MUC17_chr7_101015081_101063859	0/0	c0063	13482	1	0	1	0	0	0	copy fasta	MUC17	chr7	101015081	101063859
MUC17_chr7_101015081_101063859	0/0	c0064	13482	1	1	0	0	0	0	copy fasta	MUC17	chr7	101015081	101063859
MUC17_chr7_101015081_101063859	0/0	c0065	13482	1	0	0	0	1	0	copy fasta	MUC17	chr7	101015081	101063859
MUC17_chr7_101015081_101063859	0/0	c0066	13482	1	0	0	0	0	1	copy fasta	MUC17	chr7	101015081	101063859
MUC17_chr7_101015081_101063859	0/0	c0067	13482	1	0	0	1	0	0	copy fasta	MUC17	chr7	101015081	101063859
MUC17_chr7_101015081_101063859	0/0	c0068	13482	1	0	0	1	0	0	copy fasta	MUC17	chr7	101015081	101063859
MUC17_chr7_101015081_101063859	0/0	c0069	13482	1	0	0	1	0	0	copy fasta	MUC17	chr7	101015081	101063859
MUC17_chr7_101015081_101063859	0/0	c0070	13482	1	0	1	0	0	0	copy fasta	MUC17	chr7	101015081	101063859
MUC17_chr7_101015081_101063859	0/0	c0071	13482	1	0	0	1	0	0	copy fasta	MUC17	chr7	101015081	101063859
MUC17_chr7_101015081_101063859	0/0	c0072	13482	1	0	1	0	0	0	copy fasta	MUC17	chr7	101015081	101063859
MUC17_chr7_101015081_101063859	0/0	c0073	13482	1	0	0	1	0	0	copy fasta	MUC17	chr7	101015081	101063859
MUC17_chr7_101015081_101063859	0/0	c0074	13482	1	0	0	1	0	0	copy fasta	MUC17	chr7	101015081	101063859
MUC17_chr7_101015081_101063859	0/0	c0075	13482	1	0	0	1	0	0	copy fasta	MUC17	chr7	101015081	101063859
MUC17_chr7_101015081_101063859	0/0	c0076	13482	1	0	0	1	0	0	copy fasta	MUC17	chr7	101015081	101063859
MUC17_chr7_101015081_101063859	0/0	c0077	13482	1	1	0	0	0	0	copy fasta	MUC17	chr7	101015081	101063859
MUC17_chr7_101015081_101063859	0/0	c0078	13482	1	0	0	1	0	0	copy fasta	MUC17	chr7	101015081	101063859
MUC17_chr7_101015081_101063859	0/0	c0079	13482	1	0	0	1	0	0	copy fasta	MUC17	chr7	101015081	101063859
MUC17_chr7_101015081_101063859	0/0	c0080	13482	1	0	0	0	0	1	copy fasta	MUC17	chr7	101015081	101063859
MUC17_chr7_101015081_101063859	0/0	c0081	13482	1	1	0	0	0	0	copy fasta	MUC17	chr7	101015081	101063859
MUC17_chr7_101015081_101063859	0/0	c0082	13482	1	0	0	0	1	0	copy fasta	MUC17	chr7	101015081	101063859
MUC17_chr7_101015081_101063859	0/0	c0083	13482	1	0	0	0	0	1	copy fasta	MUC17	chr7	101015081	101063859
MUC17_chr7_101015081_101063859	0/0	c0084	13482	1	0	0	0	1	0	copy fasta	MUC17	chr7	101015081	101063859
MUC17_chr7_101015081_101063859	0/0	c0085	13482	1	0	0	0	0	1	copy fasta	MUC17	chr7	101015081	101063859
MUC17_chr7_101015081_101063859	0/0	c0086	13482	1	1	0	0	0	0	copy fasta	MUC17	chr7	101015081	101063859
MUC17_chr7_101015081_101063859	0/0	c0087	13482	1	0	0	1	0	0	copy fasta	MUC17	chr7	101015081	101063859
MUC17_chr7_101015081_101063859	0/0	c0088	13482	1	1	0	0	0	0	copy fasta	MUC17	chr7	101015081	101063859
MUC17_chr7_101015081_101063859	0/0	c0089	13482	1	1	0	0	0	0	copy fasta	MUC17	chr7	101015081	101063859
MUC17_chr7_101015081_101063859	0/0	c0090	13482	1	1	0	0	0	0	copy fasta	MUC17	chr7	101015081	101063859
MUC17_chr7_101015081_101063859	0/0	c0091	13482	1	0	0	0	0	1	copy fasta	MUC17	chr7	101015081	101063859
MUC17_chr7_101015081_101063859	0/0	c0092	13482	1	1	0	0	0	0	copy fasta	MUC17	chr7	101015081	101063859
MUC17_chr7_101015081_101063859	0/0	c0093	13482	1	0	0	1	0	0	copy fasta	MUC17	chr7	101015081	101063859
MUC17_chr7_101015081_101063859	0/0	c0094	13482	1	0	0	0	0	1	copy fasta	MUC17	chr7	101015081	101063859
MUC17_chr7_101015081_101063859	0/0	c0095	13482	1	0	1	0	0	0	copy fasta	MUC17	chr7	101015081	101063859
MUC17_chr7_101015081_101063859	0/0	c0096	13482	1	0	1	0	0	0	copy fasta	MUC17	chr7	101015081	101063859
MUC17_chr7_101015081_101063859	0/0	c0097	13482	1	0	0	0	0	1	copy fasta	MUC17	chr7	101015081	101063859
MUC17_chr7_101015081_101063859	0/0	c0098	13482	1	1	0	0	0	0	copy fasta	MUC17	chr7	101015081	101063859
MUC17_chr7_101015081_101063859	0/0	c0099	13482	1	1	0	0	0	0	copy fasta	MUC17	chr7	101015081	101063859
MUC17_chr7_101015081_101063859	0/0	c0100	13482	1	0	1	0	0	0	copy fasta	MUC17	chr7	101015081	101063859
MUC17_chr7_101015081_101063859	0/0	c0101	13482	1	0	1	0	0	0	copy fasta	MUC17	chr7	101015081	101063859
MUC17_chr7_101015081_101063859	0/0	c0102	13482	1	1	0	0	0	0	copy fasta	MUC17	chr7	101015081	101063859
MUC17_chr7_101015081_101063859	0/0	c0103	13482	1	1	0	0	0	0	copy fasta	MUC17	chr7	101015081	101063859
MUC17_chr7_101015081_101063859	0/0	c0104	13482	1	0	0	0	0	1	copy fasta	MUC17	chr7	101015081	101063859
MUC17_chr7_101015081_101063859	0/0	c0105	13482	1	0	1	0	0	0	copy fasta	MUC17	chr7	101015081	101063859
MUC17_chr7_101015081_101063859	0/0	c0106	16137	1	1	0	0	0	0	copy fasta	MUC17	chr7	101015081	101063859
MUC17_chr7_101015081_101063859	0/0	c0107	16314	1	1	0	0	0	0	copy fasta	MUC17	chr7	101015081	101063859
MUC17_chr7_101015081_101063859	0/0	c0108	16314	1	1	0	0	0	0	copy fasta	MUC17	chr7	101015081	101063859
MUC17_chr7_101015081_101063859	0/0	c0109	16314	1	1	0	0	0	0	copy fasta	MUC17	chr7	101015081	101063859
MUC17_chr7_101015081_101063859	0/0	c0110	16314	1	0	1	0	0	0	copy fasta	MUC17	chr7	101015081	101063859
MUC17_chr7_101015081_101063859	0/0	c0111	16314	1	1	0	0	0	0	copy fasta	MUC17	chr7	101015081	101063859
MUC17_chr7_101015081_101063859	0/0	c0112	16314	1	1	0	0	0	0	copy fasta	MUC17	chr7	101015081	101063859