JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	chapid	clen	total	AFR	AMR	EAS	EUR	SAS	cseq	genename	chr	start	end
MYBBP1A_chr17_4533904_4560384	0/0	c0008	3987	8	7	1	0	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	c0009	3987	7	6	1	0	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	c0010	3987	6	6	0	0	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	c0011	3987	6	0	3	3	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	c0012	3987	6	0	0	6	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	c0013	3987	5	1	2	0	1	1	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	c0014	3987	5	5	0	0	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	c0015	3987	4	4	0	0	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	c0016	3987	4	4	0	0	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	c0017	3987	4	4	0	0	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	c0018	3987	3	0	0	3	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	c0019	3987	3	3	0	0	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	c0020	3987	3	3	0	0	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	c0021	3987	3	2	1	0	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	c0022	3987	2	0	0	0	0	2	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	c0023	3987	2	1	1	0	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	c0024	3987	2	2	0	0	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	c0025	3987	2	0	1	0	0	1	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	c0026	3987	2	1	1	0	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	c0027	3987	2	0	0	2	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	c0028	3987	2	1	1	0	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	c0029	3987	2	0	2	0	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	c0030	3987	2	0	2	0	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	c0031	3987	2	0	1	0	1	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	c0032	3987	2	0	2	0	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	c0033	3987	2	2	0	0	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	c0034	3987	2	0	0	0	0	2	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	c0035	3987	1	0	0	1	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	c0036	3987	1	1	0	0	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	c0037	3987	1	0	0	0	0	1	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	c0038	3987	1	1	0	0	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	1/0	c0039	3987	1	0	0	0	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	c0040	3987	1	1	0	0	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	c0041	3987	1	1	0	0	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	c0042	3987	1	0	0	0	0	1	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	c0043	3987	1	0	1	0	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	c0044	3987	1	1	0	0	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	c0045	3987	1	0	0	1	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	c0046	3987	1	0	0	1	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	c0047	3987	1	0	0	1	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	c0048	3987	1	0	1	0	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	c0049	3987	1	1	0	0	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	c0050	3987	1	1	0	0	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	c0051	3987	1	0	1	0	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	c0052	3987	1	1	0	0	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	c0053	3987	1	1	0	0	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	c0054	3987	1	1	0	0	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	c0055	3987	1	0	0	0	1	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	c0056	3987	1	0	0	0	0	1	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	c0057	3987	1	0	0	1	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384