JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	chapid	clen	total	AFR	AMR	EAS	EUR	SAS	cseq	genename	chr	start	end
MYBBP1A_chr17_4533904_4560384	0/0	c0058	3987	1	0	0	0	1	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	c0059	3987	1	0	1	0	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	c0060	3987	1	1	0	0	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	c0061	3987	1	0	0	1	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	c0062	3987	1	1	0	0	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	c0063	3987	1	0	0	0	1	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	c0064	3987	1	1	0	0	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	c0065	3987	1	1	0	0	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	c0066	3987	1	1	0	0	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	c0067	3987	1	1	0	0	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	c0068	3987	1	1	0	0	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	c0069	3987	1	1	0	0	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	c0070	3987	1	1	0	0	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	c0071	3987	1	1	0	0	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	c0072	3987	1	1	0	0	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	c0073	3987	1	1	0	0	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	c0074	3987	1	1	0	0	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	c0075	3987	1	0	0	0	0	1	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	c0076	3987	1	1	0	0	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	c0077	3987	1	0	1	0	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	c0078	3987	1	1	0	0	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	c0079	3987	1	0	0	0	0	1	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	c0080	3987	1	0	0	0	0	1	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	c0081	3987	1	1	0	0	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	c0082	3987	1	0	0	0	0	1	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	c0083	3987	1	0	1	0	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	c0084	3987	1	1	0	0	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	c0085	3987	1	0	0	1	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	c0086	3987	1	0	0	1	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	c0087	3987	1	1	0	0	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	c0088	3987	1	1	0	0	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	c0089	3987	1	0	0	0	0	1	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	c0090	3987	1	0	0	1	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	c0091	3987	1	0	1	0	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	c0092	3987	1	1	0	0	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	c0093	3987	1	1	0	0	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	c0094	3987	1	0	0	1	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	c0095	3987	1	1	0	0	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	c0096	3987	1	1	0	0	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	c0097	3987	1	0	0	1	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	c0098	3987	1	1	0	0	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	c0099	3987	1	1	0	0	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBL1_chr8_66557175_66618218	1/1	c0001	2259	231	74	23	83	14	35	copy fasta	MYBL1	chr8	66557175	66618218
MYBL1_chr8_66557175_66618218	0/0	c0002	2259	3	3	0	0	0	0	copy fasta	MYBL1	chr8	66557175	66618218
MYBL1_chr8_66557175_66618218	0/0	c0003	2259	2	0	0	1	0	1	copy fasta	MYBL1	chr8	66557175	66618218
MYBL1_chr8_66557175_66618218	0/0	c0004	2259	1	1	0	0	0	0	copy fasta	MYBL1	chr8	66557175	66618218
MYBL1_chr8_66557175_66618218	0/0	c0005	2259	1	0	1	0	0	0	copy fasta	MYBL1	chr8	66557175	66618218
MYBL2_chr20_43662114_43721482	0/0	c0001	2103	146	44	32	52	2	16	copy fasta	MYBL2	chr20	43662114	43721482
MYBL2_chr20_43662114_43721482	1/1	c0002	2103	38	4	11	17	0	4	copy fasta	MYBL2	chr20	43662114	43721482
MYBL2_chr20_43662114_43721482	0/0	c0003	2103	30	11	1	14	0	4	copy fasta	MYBL2	chr20	43662114	43721482