JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	chapid	clen	total	AFR	AMR	EAS	EUR	SAS	cseq	genename	chr	start	end
MYO15B_chr17_75582800_75631849	0/0	c0049	9288	2	0	0	2	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	c0050	9291	2	0	0	2	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	c0051	9291	2	0	1	1	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	c0052	9291	2	0	0	0	0	2	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	c0053	9291	2	0	1	0	1	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	c0054	9247	1	0	0	0	0	1	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	c0055	9291	1	1	0	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	c0056	9247	1	0	1	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	c0057	9245	1	1	0	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	c0058	9247	1	1	0	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	c0059	9247	1	0	1	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	c0060	9247	1	0	0	1	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	c0061	9247	1	0	0	1	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	c0062	9245	1	1	0	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	c0063	9250	1	1	0	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	c0064	9247	1	1	0	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	c0065	9286	1	0	0	1	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	c0066	9291	1	1	0	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	c0067	9291	1	1	0	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	c0068	9291	1	1	0	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	c0069	9291	1	1	0	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	c0070	9289	1	1	0	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	c0071	9291	1	1	0	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	c0072	9285	1	1	0	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	c0073	9246	1	1	0	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	c0074	9289	1	1	0	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	c0075	9291	1	0	0	1	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	c0076	9291	1	1	0	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	c0077	9291	1	0	1	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	c0078	9291	1	0	0	0	0	1	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	1/0	c0079	9291	1	0	0	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	c0080	9291	1	1	0	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	c0081	9291	1	1	0	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	c0082	9291	1	1	0	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	c0083	9291	1	0	0	0	0	1	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	c0084	9291	1	1	0	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	c0085	9291	1	1	0	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	c0086	9292	1	0	1	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	c0087	9289	1	1	0	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	c0088	9291	1	0	1	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	c0089	9291	1	0	1	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	c0090	9291	1	0	1	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	c0091	9291	1	0	1	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	c0092	9291	1	0	1	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	c0093	9291	1	1	0	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	c0094	9291	1	1	0	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	c0095	9291	1	1	0	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	c0096	9289	1	1	0	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	c0097	9291	1	0	1	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	c0098	9291	1	1	0	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849