JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	chapid	clen	total	AFR	AMR	EAS	EUR	SAS	cseq	genename	chr	start	end
MYO18A_chr17_29066122_29185398	0/0	c0019	6165	1	0	0	1	0	0	copy fasta	MYO18A	chr17	29066122	29185398
MYO18A_chr17_29066122_29185398	0/0	c0020	6165	1	1	0	0	0	0	copy fasta	MYO18A	chr17	29066122	29185398
MYO18A_chr17_29066122_29185398	0/0	c0021	6165	1	0	0	1	0	0	copy fasta	MYO18A	chr17	29066122	29185398
MYO18A_chr17_29066122_29185398	0/0	c0022	6165	1	1	0	0	0	0	copy fasta	MYO18A	chr17	29066122	29185398
MYO18A_chr17_29066122_29185398	0/0	c0023	6165	1	0	0	1	0	0	copy fasta	MYO18A	chr17	29066122	29185398
MYO18A_chr17_29066122_29185398	0/0	c0024	6165	1	0	1	0	0	0	copy fasta	MYO18A	chr17	29066122	29185398
MYO18A_chr17_29066122_29185398	0/0	c0025	6165	1	1	0	0	0	0	copy fasta	MYO18A	chr17	29066122	29185398
MYO18A_chr17_29066122_29185398	0/0	c0026	6165	1	0	0	1	0	0	copy fasta	MYO18A	chr17	29066122	29185398
MYO18A_chr17_29066122_29185398	0/0	c0027	6165	1	0	0	0	0	1	copy fasta	MYO18A	chr17	29066122	29185398
MYO18A_chr17_29066122_29185398	0/0	c0028	6165	1	0	0	1	0	0	copy fasta	MYO18A	chr17	29066122	29185398
MYO18A_chr17_29066122_29185398	0/0	c0029	6165	1	1	0	0	0	0	copy fasta	MYO18A	chr17	29066122	29185398
MYO18A_chr17_29066122_29185398	0/0	c0030	6165	1	0	1	0	0	0	copy fasta	MYO18A	chr17	29066122	29185398
MYO18A_chr17_29066122_29185398	0/0	c0031	6165	1	1	0	0	0	0	copy fasta	MYO18A	chr17	29066122	29185398
MYO18A_chr17_29066122_29185398	0/0	c0032	6165	1	0	1	0	0	0	copy fasta	MYO18A	chr17	29066122	29185398
MYO18A_chr17_29066122_29185398	0/0	c0033	6165	1	0	0	1	0	0	copy fasta	MYO18A	chr17	29066122	29185398
MYO18A_chr17_29066122_29185398	0/0	c0034	6165	1	1	0	0	0	0	copy fasta	MYO18A	chr17	29066122	29185398
MYO18A_chr17_29066122_29185398	0/0	c0035	6165	1	0	1	0	0	0	copy fasta	MYO18A	chr17	29066122	29185398
MYO18B_chr22_25737188_26036045	0/0	c0001	7704	9	1	0	7	0	1	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	c0002	7704	9	0	1	6	0	2	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	c0003	7704	5	0	0	5	0	0	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	c0004	7704	5	0	0	4	0	1	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	c0005	7704	4	0	0	4	0	0	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	c0006	7704	4	0	1	3	0	0	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	c0007	7704	3	0	1	2	0	0	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	c0008	7704	3	1	0	2	0	0	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	c0009	7704	3	0	0	2	0	1	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	c0010	7704	3	0	0	3	0	0	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	c0011	7704	3	0	1	1	0	1	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	c0012	7704	3	1	2	0	0	0	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	c0013	7704	3	0	2	0	0	1	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	c0014	7704	3	0	1	0	1	1	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	c0015	7704	3	0	0	2	0	1	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	c0016	7704	2	2	0	0	0	0	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	c0017	7704	2	2	0	0	0	0	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	c0018	7704	2	2	0	0	0	0	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	c0019	7704	2	0	1	0	1	0	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	c0020	7704	2	0	1	1	0	0	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	c0021	7704	2	0	2	0	0	0	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	c0022	7704	2	0	0	2	0	0	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	c0023	7704	2	0	0	2	0	0	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	c0024	7704	2	0	2	0	0	0	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	c0025	7704	2	2	0	0	0	0	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	c0026	7704	2	1	1	0	0	0	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	c0027	7704	2	2	0	0	0	0	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	c0028	7704	2	2	0	0	0	0	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	c0029	7704	2	0	0	2	0	0	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	c0030	7704	2	0	0	2	0	0	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	c0031	7704	2	0	0	1	0	1	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	c0032	7704	2	2	0	0	0	0	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	c0033	7704	2	0	0	2	0	0	copy fasta	MYO18B	chr22	25737188	26036045