JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	chapid	clen	total	AFR	AMR	EAS	EUR	SAS	cseq	genename	chr	start	end
MYO18B_chr22_25737188_26036045	0/0	c0034	7704	2	0	0	0	0	2	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	c0035	7704	2	0	2	0	0	0	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	c0036	7704	2	0	2	0	0	0	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	c0037	7704	2	0	2	0	0	0	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	c0038	7704	1	0	1	0	0	0	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	c0039	7704	1	0	1	0	0	0	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	c0040	7704	1	0	0	0	1	0	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	c0041	7704	1	1	0	0	0	0	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	c0042	7704	1	1	0	0	0	0	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	c0043	7704	1	1	0	0	0	0	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	c0044	7704	1	1	0	0	0	0	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	c0045	7704	1	1	0	0	0	0	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	c0046	7704	1	1	0	0	0	0	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	c0047	7704	1	1	0	0	0	0	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	c0048	7704	1	1	0	0	0	0	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	c0049	7704	1	1	0	0	0	0	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	c0050	7704	1	1	0	0	0	0	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	c0051	7704	1	1	0	0	0	0	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	c0052	7704	1	1	0	0	0	0	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	c0053	7704	1	1	0	0	0	0	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	c0054	7704	1	1	0	0	0	0	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	c0055	7704	1	1	0	0	0	0	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	c0056	7704	1	1	0	0	0	0	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	c0057	7704	1	1	0	0	0	0	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	c0058	7704	1	1	0	0	0	0	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	c0059	7704	1	0	1	0	0	0	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	c0060	7704	1	1	0	0	0	0	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	c0061	7704	1	1	0	0	0	0	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	c0062	7704	1	1	0	0	0	0	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	c0063	7704	1	1	0	0	0	0	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	c0064	7704	1	1	0	0	0	0	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	c0065	7704	1	1	0	0	0	0	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	c0066	7704	1	0	0	0	1	0	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	c0067	7704	1	0	0	0	0	1	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	c0068	7704	1	0	0	0	1	0	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	c0069	7704	1	0	0	1	0	0	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	c0070	7704	1	1	0	0	0	0	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	c0071	7704	1	0	0	1	0	0	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	c0072	7704	1	1	0	0	0	0	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	c0073	7704	1	1	0	0	0	0	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	c0074	7704	1	1	0	0	0	0	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	c0075	7704	1	1	0	0	0	0	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	c0076	7704	1	0	0	0	1	0	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	c0077	7704	1	1	0	0	0	0	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	c0078	7704	1	1	0	0	0	0	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	c0079	7704	1	1	0	0	0	0	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	c0080	7704	1	1	0	0	0	0	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	c0081	7704	1	1	0	0	0	0	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	c0082	7704	1	1	0	0	0	0	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	c0083	7704	1	1	0	0	0	0	copy fasta	MYO18B	chr22	25737188	26036045