JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	chapid	clen	total	AFR	AMR	EAS	EUR	SAS	cseq	genename	chr	start	end
MYO7A_chr11_77123246_77220241	0/0	c0058	6649	1	0	1	0	0	0	copy fasta	MYO7A	chr11	77123246	77220241
MYO7A_chr11_77123246_77220241	0/0	c0059	6649	1	1	0	0	0	0	copy fasta	MYO7A	chr11	77123246	77220241
MYO7A_chr11_77123246_77220241	0/0	c0060	6648	1	1	0	0	0	0	copy fasta	MYO7A	chr11	77123246	77220241
MYO7A_chr11_77123246_77220241	0/0	c0061	6648	1	1	0	0	0	0	copy fasta	MYO7A	chr11	77123246	77220241
MYO7A_chr11_77123246_77220241	0/0	c0062	6648	1	1	0	0	0	0	copy fasta	MYO7A	chr11	77123246	77220241
MYO7A_chr11_77123246_77220241	0/0	c0063	6648	1	0	1	0	0	0	copy fasta	MYO7A	chr11	77123246	77220241
MYO7A_chr11_77123246_77220241	0/0	c0064	6648	1	1	0	0	0	0	copy fasta	MYO7A	chr11	77123246	77220241
MYO7A_chr11_77123246_77220241	0/0	c0065	6648	1	1	0	0	0	0	copy fasta	MYO7A	chr11	77123246	77220241
MYO7A_chr11_77123246_77220241	0/0	c0066	6648	1	1	0	0	0	0	copy fasta	MYO7A	chr11	77123246	77220241
MYO7A_chr11_77123246_77220241	0/0	c0067	6648	1	0	0	0	0	1	copy fasta	MYO7A	chr11	77123246	77220241
MYO7A_chr11_77123246_77220241	0/0	c0068	6648	1	1	0	0	0	0	copy fasta	MYO7A	chr11	77123246	77220241
MYO7A_chr11_77123246_77220241	0/0	c0069	6648	1	1	0	0	0	0	copy fasta	MYO7A	chr11	77123246	77220241
MYO7A_chr11_77123246_77220241	0/0	c0070	6648	1	1	0	0	0	0	copy fasta	MYO7A	chr11	77123246	77220241
MYO7A_chr11_77123246_77220241	0/0	c0071	6648	1	1	0	0	0	0	copy fasta	MYO7A	chr11	77123246	77220241
MYO7A_chr11_77123246_77220241	0/0	c0072	6648	1	1	0	0	0	0	copy fasta	MYO7A	chr11	77123246	77220241
MYO7A_chr11_77123246_77220241	0/0	c0073	6788	1	0	1	0	0	0	copy fasta	MYO7A	chr11	77123246	77220241
MYO7A_chr11_77123246_77220241	0/0	c0074	6648	1	1	0	0	0	0	copy fasta	MYO7A	chr11	77123246	77220241
MYO7A_chr11_77123246_77220241	0/0	c0075	6648	1	1	0	0	0	0	copy fasta	MYO7A	chr11	77123246	77220241
MYO7A_chr11_77123246_77220241	0/0	c0076	6648	1	0	0	0	0	1	copy fasta	MYO7A	chr11	77123246	77220241
MYO7A_chr11_77123246_77220241	0/0	c0077	6648	1	0	0	0	0	1	copy fasta	MYO7A	chr11	77123246	77220241
MYO7A_chr11_77123246_77220241	0/0	c0078	6649	1	0	1	0	0	0	copy fasta	MYO7A	chr11	77123246	77220241
MYO7A_chr11_77123246_77220241	0/0	c0079	6649	1	0	1	0	0	0	copy fasta	MYO7A	chr11	77123246	77220241
MYO7A_chr11_77123246_77220241	0/0	c0080	6649	1	0	0	1	0	0	copy fasta	MYO7A	chr11	77123246	77220241
MYO7A_chr11_77123246_77220241	0/0	c0081	6719	1	0	0	1	0	0	copy fasta	MYO7A	chr11	77123246	77220241
MYO7A_chr11_77123246_77220241	0/0	c0082	6648	1	0	0	1	0	0	copy fasta	MYO7A	chr11	77123246	77220241
MYO7A_chr11_77123246_77220241	0/0	c0083	6648	1	0	0	1	0	0	copy fasta	MYO7A	chr11	77123246	77220241
MYO7A_chr11_77123246_77220241	0/0	c0084	6648	1	1	0	0	0	0	copy fasta	MYO7A	chr11	77123246	77220241
MYO7A_chr11_77123246_77220241	0/0	c0085	6648	1	1	0	0	0	0	copy fasta	MYO7A	chr11	77123246	77220241
MYO7A_chr11_77123246_77220241	0/0	c0086	6648	1	0	1	0	0	0	copy fasta	MYO7A	chr11	77123246	77220241
MYO7A_chr11_77123246_77220241	0/0	c0087	6648	1	1	0	0	0	0	copy fasta	MYO7A	chr11	77123246	77220241
MYO7A_chr11_77123246_77220241	0/0	c0088	6648	1	0	1	0	0	0	copy fasta	MYO7A	chr11	77123246	77220241
MYO7A_chr11_77123246_77220241	0/0	c0089	6648	1	0	0	1	0	0	copy fasta	MYO7A	chr11	77123246	77220241
MYO7A_chr11_77123246_77220241	0/0	c0090	6648	1	0	0	0	0	1	copy fasta	MYO7A	chr11	77123246	77220241
MYO7A_chr11_77123246_77220241	0/0	c0091	6648	1	0	1	0	0	0	copy fasta	MYO7A	chr11	77123246	77220241
MYO7A_chr11_77123246_77220241	0/0	c0092	6648	1	0	0	0	1	0	copy fasta	MYO7A	chr11	77123246	77220241
MYO7A_chr11_77123246_77220241	0/0	c0093	6648	1	1	0	0	0	0	copy fasta	MYO7A	chr11	77123246	77220241
MYO7A_chr11_77123246_77220241	0/0	c0094	6649	1	1	0	0	0	0	copy fasta	MYO7A	chr11	77123246	77220241
MYO7A_chr11_77123246_77220241	0/0	c0095	6649	1	1	0	0	0	0	copy fasta	MYO7A	chr11	77123246	77220241
MYO7A_chr11_77123246_77220241	0/0	c0096	6649	1	1	0	0	0	0	copy fasta	MYO7A	chr11	77123246	77220241
MYO7A_chr11_77123246_77220241	0/0	c0097	6648	1	1	0	0	0	0	copy fasta	MYO7A	chr11	77123246	77220241
MYO7A_chr11_77123246_77220241	0/0	c0098	6649	1	1	0	0	0	0	copy fasta	MYO7A	chr11	77123246	77220241
MYO7A_chr11_77123246_77220241	0/0	c0099	6649	1	1	0	0	0	0	copy fasta	MYO7A	chr11	77123246	77220241
MYO7A_chr11_77123246_77220241	0/0	c0100	6649	1	0	1	0	0	0	copy fasta	MYO7A	chr11	77123246	77220241
MYO7A_chr11_77123246_77220241	0/0	c0101	6648	1	0	0	1	0	0	copy fasta	MYO7A	chr11	77123246	77220241
MYO7A_chr11_77123246_77220241	0/0	c0102	6648	1	1	0	0	0	0	copy fasta	MYO7A	chr11	77123246	77220241
MYO7A_chr11_77123246_77220241	0/0	c0103	6648	1	0	1	0	0	0	copy fasta	MYO7A	chr11	77123246	77220241
MYO7A_chr11_77123246_77220241	0/0	c0104	6648	1	0	0	1	0	0	copy fasta	MYO7A	chr11	77123246	77220241
MYO7A_chr11_77123246_77220241	0/0	c0105	6648	1	1	0	0	0	0	copy fasta	MYO7A	chr11	77123246	77220241
MYO7A_chr11_77123246_77220241	0/0	c0106	6648	1	0	1	0	0	0	copy fasta	MYO7A	chr11	77123246	77220241
MYO7A_chr11_77123246_77220241	0/0	c0107	6648	1	0	0	1	0	0	copy fasta	MYO7A	chr11	77123246	77220241