JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	chapid	clen	total	AFR	AMR	EAS	EUR	SAS	cseq	genename	chr	start	end
MYOM3_chr1_24051041_24117135	0/0	c0021	4314	3	3	0	0	0	0	copy fasta	MYOM3	chr1	24051041	24117135
MYOM3_chr1_24051041_24117135	0/0	c0022	4314	3	1	0	2	0	0	copy fasta	MYOM3	chr1	24051041	24117135
MYOM3_chr1_24051041_24117135	0/0	c0023	4314	3	0	0	3	0	0	copy fasta	MYOM3	chr1	24051041	24117135
MYOM3_chr1_24051041_24117135	0/0	c0024	4314	3	2	1	0	0	0	copy fasta	MYOM3	chr1	24051041	24117135
MYOM3_chr1_24051041_24117135	0/0	c0025	4314	3	0	3	0	0	0	copy fasta	MYOM3	chr1	24051041	24117135
MYOM3_chr1_24051041_24117135	0/0	c0026	4314	3	0	2	1	0	0	copy fasta	MYOM3	chr1	24051041	24117135
MYOM3_chr1_24051041_24117135	0/0	c0027	4314	2	0	2	0	0	0	copy fasta	MYOM3	chr1	24051041	24117135
MYOM3_chr1_24051041_24117135	0/0	c0028	4314	2	2	0	0	0	0	copy fasta	MYOM3	chr1	24051041	24117135
MYOM3_chr1_24051041_24117135	0/0	c0029	4314	2	2	0	0	0	0	copy fasta	MYOM3	chr1	24051041	24117135
MYOM3_chr1_24051041_24117135	0/0	c0030	4314	2	1	1	0	0	0	copy fasta	MYOM3	chr1	24051041	24117135
MYOM3_chr1_24051041_24117135	0/0	c0031	4314	2	0	2	0	0	0	copy fasta	MYOM3	chr1	24051041	24117135
MYOM3_chr1_24051041_24117135	0/0	c0032	4314	2	0	0	0	0	2	copy fasta	MYOM3	chr1	24051041	24117135
MYOM3_chr1_24051041_24117135	0/0	c0033	4314	2	0	0	0	2	0	copy fasta	MYOM3	chr1	24051041	24117135
MYOM3_chr1_24051041_24117135	0/0	c0034	4314	2	0	0	2	0	0	copy fasta	MYOM3	chr1	24051041	24117135
MYOM3_chr1_24051041_24117135	0/0	c0035	4314	2	0	1	0	0	1	copy fasta	MYOM3	chr1	24051041	24117135
MYOM3_chr1_24051041_24117135	0/0	c0036	4314	1	0	0	0	0	1	copy fasta	MYOM3	chr1	24051041	24117135
MYOM3_chr1_24051041_24117135	0/0	c0037	4314	1	0	0	1	0	0	copy fasta	MYOM3	chr1	24051041	24117135
MYOM3_chr1_24051041_24117135	0/0	c0038	4314	1	0	0	0	0	1	copy fasta	MYOM3	chr1	24051041	24117135
MYOM3_chr1_24051041_24117135	0/0	c0039	4314	1	0	0	0	0	1	copy fasta	MYOM3	chr1	24051041	24117135
MYOM3_chr1_24051041_24117135	0/0	c0040	4314	1	0	0	1	0	0	copy fasta	MYOM3	chr1	24051041	24117135
MYOM3_chr1_24051041_24117135	0/0	c0041	4314	1	0	1	0	0	0	copy fasta	MYOM3	chr1	24051041	24117135
MYOM3_chr1_24051041_24117135	0/0	c0042	4314	1	1	0	0	0	0	copy fasta	MYOM3	chr1	24051041	24117135
MYOM3_chr1_24051041_24117135	0/0	c0043	4314	1	0	0	1	0	0	copy fasta	MYOM3	chr1	24051041	24117135
MYOM3_chr1_24051041_24117135	0/0	c0044	4314	1	1	0	0	0	0	copy fasta	MYOM3	chr1	24051041	24117135
MYOM3_chr1_24051041_24117135	0/0	c0045	4314	1	1	0	0	0	0	copy fasta	MYOM3	chr1	24051041	24117135
MYOM3_chr1_24051041_24117135	0/0	c0046	4314	1	0	1	0	0	0	copy fasta	MYOM3	chr1	24051041	24117135
MYOM3_chr1_24051041_24117135	0/0	c0047	4314	1	0	1	0	0	0	copy fasta	MYOM3	chr1	24051041	24117135
MYOM3_chr1_24051041_24117135	0/0	c0048	4314	1	1	0	0	0	0	copy fasta	MYOM3	chr1	24051041	24117135
MYOM3_chr1_24051041_24117135	0/0	c0049	4314	1	1	0	0	0	0	copy fasta	MYOM3	chr1	24051041	24117135
MYOM3_chr1_24051041_24117135	0/0	c0050	4314	1	0	0	0	1	0	copy fasta	MYOM3	chr1	24051041	24117135
MYOM3_chr1_24051041_24117135	0/0	c0051	4314	1	0	0	0	0	1	copy fasta	MYOM3	chr1	24051041	24117135
MYOM3_chr1_24051041_24117135	0/0	c0052	4314	1	1	0	0	0	0	copy fasta	MYOM3	chr1	24051041	24117135
MYOM3_chr1_24051041_24117135	0/0	c0053	4314	1	1	0	0	0	0	copy fasta	MYOM3	chr1	24051041	24117135
MYOM3_chr1_24051041_24117135	0/0	c0054	4314	1	0	0	1	0	0	copy fasta	MYOM3	chr1	24051041	24117135
MYOM3_chr1_24051041_24117135	0/0	c0055	4314	1	1	0	0	0	0	copy fasta	MYOM3	chr1	24051041	24117135
MYOM3_chr1_24051041_24117135	0/0	c0056	4314	1	1	0	0	0	0	copy fasta	MYOM3	chr1	24051041	24117135
MYOM3_chr1_24051041_24117135	0/0	c0057	4314	1	1	0	0	0	0	copy fasta	MYOM3	chr1	24051041	24117135
MYOM3_chr1_24051041_24117135	0/0	c0058	4314	1	0	1	0	0	0	copy fasta	MYOM3	chr1	24051041	24117135
MYOM3_chr1_24051041_24117135	0/0	c0059	4314	1	0	1	0	0	0	copy fasta	MYOM3	chr1	24051041	24117135
MYOM3_chr1_24051041_24117135	0/0	c0060	4314	1	1	0	0	0	0	copy fasta	MYOM3	chr1	24051041	24117135
MYOM3_chr1_24051041_24117135	0/0	c0061	4314	1	0	0	0	0	1	copy fasta	MYOM3	chr1	24051041	24117135
MYOM3_chr1_24051041_24117135	0/0	c0062	4314	1	1	0	0	0	0	copy fasta	MYOM3	chr1	24051041	24117135
MYOM3_chr1_24051041_24117135	0/0	c0063	4314	1	1	0	0	0	0	copy fasta	MYOM3	chr1	24051041	24117135
MYOM3_chr1_24051041_24117135	0/0	c0064	4314	1	1	0	0	0	0	copy fasta	MYOM3	chr1	24051041	24117135
MYOM3_chr1_24051041_24117135	0/0	c0065	4314	1	0	0	1	0	0	copy fasta	MYOM3	chr1	24051041	24117135
MYOM3_chr1_24051041_24117135	0/0	c0066	4314	1	1	0	0	0	0	copy fasta	MYOM3	chr1	24051041	24117135
MYOM3_chr1_24051041_24117135	0/0	c0067	4314	1	1	0	0	0	0	copy fasta	MYOM3	chr1	24051041	24117135
MYOM3_chr1_24051041_24117135	0/0	c0068	4314	1	1	0	0	0	0	copy fasta	MYOM3	chr1	24051041	24117135
MYOM3_chr1_24051041_24117135	0/0	c0069	4314	1	0	0	1	0	0	copy fasta	MYOM3	chr1	24051041	24117135
MYOM3_chr1_24051041_24117135	0/0	c0070	4314	1	1	0	0	0	0	copy fasta	MYOM3	chr1	24051041	24117135