JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	chapid	clen	total	AFR	AMR	EAS	SAS	cseq	genename	chr	start	end
NCOR2_chr12_124319415_124572612	0/0	c0060	7566	1	0	1	0	0	copy fasta	NCOR2	chr12	124319415	124572612
NCOR2_chr12_124319415_124572612	0/0	c0061	7566	1	0	0	1	0	copy fasta	NCOR2	chr12	124319415	124572612
NCOR2_chr12_124319415_124572612	0/0	c0062	7566	1	0	0	0	1	copy fasta	NCOR2	chr12	124319415	124572612
NCOR2_chr12_124319415_124572612	0/0	c0063	7566	1	1	0	0	0	copy fasta	NCOR2	chr12	124319415	124572612
NCOR2_chr12_124319415_124572612	0/0	c0064	7563	1	1	0	0	0	copy fasta	NCOR2	chr12	124319415	124572612
NCOR2_chr12_124319415_124572612	0/0	c0065	7563	1	1	0	0	0	copy fasta	NCOR2	chr12	124319415	124572612
NCOR2_chr12_124319415_124572612	0/0	c0066	7563	1	0	0	1	0	copy fasta	NCOR2	chr12	124319415	124572612
NCOR2_chr12_124319415_124572612	0/0	c0067	7563	1	0	0	0	1	copy fasta	NCOR2	chr12	124319415	124572612
NCOR2_chr12_124319415_124572612	0/0	c0068	7563	1	1	0	0	0	copy fasta	NCOR2	chr12	124319415	124572612
NCOR2_chr12_124319415_124572612	0/0	c0069	7563	1	0	0	1	0	copy fasta	NCOR2	chr12	124319415	124572612
NCOR2_chr12_124319415_124572612	0/0	c0070	7560	1	0	1	0	0	copy fasta	NCOR2	chr12	124319415	124572612
NCOR2_chr12_124319415_124572612	0/0	c0071	7560	1	0	1	0	0	copy fasta	NCOR2	chr12	124319415	124572612
NCOR2_chr12_124319415_124572612	0/0	c0072	7560	1	1	0	0	0	copy fasta	NCOR2	chr12	124319415	124572612
NCOR2_chr12_124319415_124572612	0/0	c0073	7560	1	1	0	0	0	copy fasta	NCOR2	chr12	124319415	124572612
NCOR2_chr12_124319415_124572612	0/0	c0074	7560	1	0	1	0	0	copy fasta	NCOR2	chr12	124319415	124572612
NCOR2_chr12_124319415_124572612	0/0	c0075	7560	1	0	0	1	0	copy fasta	NCOR2	chr12	124319415	124572612
NCOR2_chr12_124319415_124572612	0/0	c0076	7551	1	1	0	0	0	copy fasta	NCOR2	chr12	124319415	124572612
NCOR2_chr12_124319415_124572612	0/0	c0077	7560	1	1	0	0	0	copy fasta	NCOR2	chr12	124319415	124572612
NCOR2_chr12_124319415_124572612	0/0	c0078	7560	1	1	0	0	0	copy fasta	NCOR2	chr12	124319415	124572612
NCOR2_chr12_124319415_124572612	0/0	c0079	7560	1	0	0	1	0	copy fasta	NCOR2	chr12	124319415	124572612
NCOR2_chr12_124319415_124572612	0/0	c0080	7560	1	0	1	0	0	copy fasta	NCOR2	chr12	124319415	124572612
NCOR2_chr12_124319415_124572612	0/0	c0081	7560	1	0	1	0	0	copy fasta	NCOR2	chr12	124319415	124572612
NCOR2_chr12_124319415_124572612	0/0	c0082	7557	1	1	0	0	0	copy fasta	NCOR2	chr12	124319415	124572612
NCOR2_chr12_124319415_124572612	0/0	c0083	7557	1	0	1	0	0	copy fasta	NCOR2	chr12	124319415	124572612
NCOR2_chr12_124319415_124572612	0/0	c0084	7557	1	1	0	0	0	copy fasta	NCOR2	chr12	124319415	124572612
NCOR2_chr12_124319415_124572612	0/0	c0085	7557	1	0	0	1	0	copy fasta	NCOR2	chr12	124319415	124572612
NCOR2_chr12_124319415_124572612	0/0	c0086	7557	1	1	0	0	0	copy fasta	NCOR2	chr12	124319415	124572612
NCOR2_chr12_124319415_124572612	0/0	c0087	7557	1	1	0	0	0	copy fasta	NCOR2	chr12	124319415	124572612
NCOR2_chr12_124319415_124572612	0/0	c0088	7557	1	0	0	0	1	copy fasta	NCOR2	chr12	124319415	124572612
NCOR2_chr12_124319415_124572612	0/0	c0089	7557	1	1	0	0	0	copy fasta	NCOR2	chr12	124319415	124572612
NCOR2_chr12_124319415_124572612	0/0	c0090	7557	1	0	0	1	0	copy fasta	NCOR2	chr12	124319415	124572612
NCOR2_chr12_124319415_124572612	0/0	c0091	7557	1	1	0	0	0	copy fasta	NCOR2	chr12	124319415	124572612
NCOR2_chr12_124319415_124572612	0/0	c0092	7557	1	0	0	0	1	copy fasta	NCOR2	chr12	124319415	124572612
NCOR2_chr12_124319415_124572612	0/0	c0093	7557	1	0	0	1	0	copy fasta	NCOR2	chr12	124319415	124572612
NCOR2_chr12_124319415_124572612	0/0	c0094	7557	1	0	0	1	0	copy fasta	NCOR2	chr12	124319415	124572612
NCOR2_chr12_124319415_124572612	0/0	c0095	7557	1	0	0	1	0	copy fasta	NCOR2	chr12	124319415	124572612
NCOR2_chr12_124319415_124572612	0/0	c0096	7557	1	1	0	0	0	copy fasta	NCOR2	chr12	124319415	124572612
NCOR2_chr12_124319415_124572612	0/0	c0097	7557	1	0	0	1	0	copy fasta	NCOR2	chr12	124319415	124572612
NCOR2_chr12_124319415_124572612	0/0	c0098	7557	1	0	1	0	0	copy fasta	NCOR2	chr12	124319415	124572612
NCOR2_chr12_124319415_124572612	0/0	c0099	7557	1	0	0	0	1	copy fasta	NCOR2	chr12	124319415	124572612
NCOR2_chr12_124319415_124572612	0/0	c0100	7558	1	0	0	0	1	copy fasta	NCOR2	chr12	124319415	124572612
NCOR2_chr12_124319415_124572612	0/0	c0101	7557	1	1	0	0	0	copy fasta	NCOR2	chr12	124319415	124572612
NCOR2_chr12_124319415_124572612	0/0	c0102	7554	1	1	0	0	0	copy fasta	NCOR2	chr12	124319415	124572612
NCOR2_chr12_124319415_124572612	0/0	c0103	7554	1	1	0	0	0	copy fasta	NCOR2	chr12	124319415	124572612
NCOR2_chr12_124319415_124572612	0/0	c0104	7554	1	0	0	0	1	copy fasta	NCOR2	chr12	124319415	124572612
NCOR2_chr12_124319415_124572612	0/0	c0105	7554	1	1	0	0	0	copy fasta	NCOR2	chr12	124319415	124572612
NCOR2_chr12_124319415_124572612	0/0	c0106	7554	1	1	0	0	0	copy fasta	NCOR2	chr12	124319415	124572612
NCOR2_chr12_124319415_124572612	0/0	c0107	7554	1	1	0	0	0	copy fasta	NCOR2	chr12	124319415	124572612
NCOR2_chr12_124319415_124572612	0/0	c0108	7554	1	1	0	0	0	copy fasta	NCOR2	chr12	124319415	124572612
NCOR2_chr12_124319415_124572612	0/0	c0109	7554	1	1	0	0	0	copy fasta	NCOR2	chr12	124319415	124572612