JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	chapid	clen	total	AFR	AMR	EAS	EUR	SAS	cseq	genename	chr	start	end
NOS1_chr12_117203142_117366626	0/0	c0019	4305	1	0	0	1	0	0	copy fasta	NOS1	chr12	117203142	117366626
NOS1_chr12_117203142_117366626	0/0	c0020	4305	1	0	0	1	0	0	copy fasta	NOS1	chr12	117203142	117366626
NOS1_chr12_117203142_117366626	0/0	c0021	4305	1	0	0	1	0	0	copy fasta	NOS1	chr12	117203142	117366626
NOS1_chr12_117203142_117366626	0/0	c0022	4305	1	1	0	0	0	0	copy fasta	NOS1	chr12	117203142	117366626
NOS1_chr12_117203142_117366626	0/0	c0023	4305	1	0	0	1	0	0	copy fasta	NOS1	chr12	117203142	117366626
NOS1_chr12_117203142_117366626	0/0	c0024	4305	1	1	0	0	0	0	copy fasta	NOS1	chr12	117203142	117366626
NOS1_chr12_117203142_117366626	0/0	c0025	4305	1	1	0	0	0	0	copy fasta	NOS1	chr12	117203142	117366626
NOS1_chr12_117203142_117366626	0/0	c0026	4305	1	0	0	1	0	0	copy fasta	NOS1	chr12	117203142	117366626
NOS1_chr12_117203142_117366626	0/0	c0027	4305	1	0	0	1	0	0	copy fasta	NOS1	chr12	117203142	117366626
NOS1_chr12_117203142_117366626	0/0	c0028	4305	1	1	0	0	0	0	copy fasta	NOS1	chr12	117203142	117366626
NOS1_chr12_117203142_117366626	0/0	c0029	4305	1	0	0	0	0	1	copy fasta	NOS1	chr12	117203142	117366626
NOS1_chr12_117203142_117366626	0/0	c0030	4305	1	0	0	1	0	0	copy fasta	NOS1	chr12	117203142	117366626
NOS1_chr12_117203142_117366626	0/0	c0031	4305	1	0	0	1	0	0	copy fasta	NOS1	chr12	117203142	117366626
NOS1_chr12_117203142_117366626	0/0	c0032	4305	1	0	0	1	0	0	copy fasta	NOS1	chr12	117203142	117366626
NOS1_chr12_117203142_117366626	0/0	c0033	4305	1	1	0	0	0	0	copy fasta	NOS1	chr12	117203142	117366626
NOS1_chr12_117203142_117366626	0/0	c0034	4305	1	1	0	0	0	0	copy fasta	NOS1	chr12	117203142	117366626
NOS1_chr12_117203142_117366626	0/0	c0035	4305	1	1	0	0	0	0	copy fasta	NOS1	chr12	117203142	117366626
NOS1_chr12_117203142_117366626	0/0	c0036	4305	1	1	0	0	0	0	copy fasta	NOS1	chr12	117203142	117366626
NOS1_chr12_117203142_117366626	0/0	c0037	4305	1	1	0	0	0	0	copy fasta	NOS1	chr12	117203142	117366626
NOS2_chr17_27751766_27805529	0/0	c0001	3462	190	32	30	101	6	21	copy fasta	NOS2	chr17	27751766	27805529
NOS2_chr17_27751766_27805529	1/0	c0002	3462	87	17	18	38	8	5	copy fasta	NOS2	chr17	27751766	27805529
NOS2_chr17_27751766_27805529	0/1	c0003	3462	40	11	5	13	2	8	copy fasta	NOS2	chr17	27751766	27805529
NOS2_chr17_27751766_27805529	0/0	c0004	3462	14	9	2	1	0	2	copy fasta	NOS2	chr17	27751766	27805529
NOS2_chr17_27751766_27805529	0/0	c0005	3462	12	6	3	2	0	1	copy fasta	NOS2	chr17	27751766	27805529
NOS2_chr17_27751766_27805529	0/0	c0006	3462	9	0	7	2	0	0	copy fasta	NOS2	chr17	27751766	27805529
NOS2_chr17_27751766_27805529	0/0	c0007	3462	8	1	1	5	1	0	copy fasta	NOS2	chr17	27751766	27805529
NOS2_chr17_27751766_27805529	0/0	c0008	3462	7	0	4	2	1	0	copy fasta	NOS2	chr17	27751766	27805529
NOS2_chr17_27751766_27805529	0/0	c0009	3462	7	0	0	7	0	0	copy fasta	NOS2	chr17	27751766	27805529
NOS2_chr17_27751766_27805529	0/0	c0010	3462	4	4	0	0	0	0	copy fasta	NOS2	chr17	27751766	27805529
NOS2_chr17_27751766_27805529	0/0	c0011	3462	3	0	0	3	0	0	copy fasta	NOS2	chr17	27751766	27805529
NOS2_chr17_27751766_27805529	0/0	c0012	3462	2	1	1	0	0	0	copy fasta	NOS2	chr17	27751766	27805529
NOS2_chr17_27751766_27805529	0/0	c0013	3462	2	0	0	0	0	2	copy fasta	NOS2	chr17	27751766	27805529
NOS2_chr17_27751766_27805529	0/0	c0014	3462	1	0	1	0	0	0	copy fasta	NOS2	chr17	27751766	27805529
NOS2_chr17_27751766_27805529	0/0	c0015	3462	1	0	0	1	0	0	copy fasta	NOS2	chr17	27751766	27805529
NOS2_chr17_27751766_27805529	0/0	c0016	3462	1	0	1	0	0	0	copy fasta	NOS2	chr17	27751766	27805529
NOS2_chr17_27751766_27805529	0/0	c0017	3462	1	1	0	0	0	0	copy fasta	NOS2	chr17	27751766	27805529
NOS2_chr17_27751766_27805529	0/0	c0018	3462	1	1	0	0	0	0	copy fasta	NOS2	chr17	27751766	27805529
NOS2_chr17_27751766_27805529	0/0	c0019	3462	1	0	0	1	0	0	copy fasta	NOS2	chr17	27751766	27805529
NOS2_chr17_27751766_27805529	0/0	c0020	3462	1	0	0	0	0	1	copy fasta	NOS2	chr17	27751766	27805529
NOS2_chr17_27751766_27805529	0/0	c0021	3462	1	0	1	0	0	0	copy fasta	NOS2	chr17	27751766	27805529
NOS2_chr17_27751766_27805529	0/0	c0022	3462	1	0	0	1	0	0	copy fasta	NOS2	chr17	27751766	27805529
NOS2_chr17_27751766_27805529	0/0	c0023	3462	1	1	0	0	0	0	copy fasta	NOS2	chr17	27751766	27805529
NOS2_chr17_27751766_27805529	0/0	c0024	3462	1	0	0	1	0	0	copy fasta	NOS2	chr17	27751766	27805529
NOS2_chr17_27751766_27805529	0/0	c0025	3462	1	1	0	0	0	0	copy fasta	NOS2	chr17	27751766	27805529
NOS2_chr17_27751766_27805529	0/0	c0026	3462	1	1	0	0	0	0	copy fasta	NOS2	chr17	27751766	27805529
NOS2_chr17_27751766_27805529	0/0	c0027	3462	1	0	0	1	0	0	copy fasta	NOS2	chr17	27751766	27805529
NOS2_chr17_27751766_27805529	0/0	c0028	3462	1	1	0	0	0	0	copy fasta	NOS2	chr17	27751766	27805529
NOS2_chr17_27751766_27805529	0/0	c0029	3462	1	1	0	0	0	0	copy fasta	NOS2	chr17	27751766	27805529
NOS2_chr17_27751766_27805529	0/0	c0030	3461	1	0	0	1	0	0	copy fasta	NOS2	chr17	27751766	27805529
NOS3_chr7_150986017_151019588	0/1	c0001	3612	144	35	22	61	7	18	copy fasta	NOS3	chr7	150986017	151019588