JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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Choose a field to sort by.

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	chapid	clen	total	AFR	AMR	EAS	EUR	SAS	cseq	genename	chr	start	end
NOS3_chr7_150986017_151019588	0/0	c0002	3612	138	29	25	68	1	15	copy fasta	NOS3	chr7	150986017	151019588
NOS3_chr7_150986017_151019588	1/0	c0003	3612	41	3	17	14	3	3	copy fasta	NOS3	chr7	150986017	151019588
NOS3_chr7_150986017_151019588	0/0	c0004	3612	8	0	0	8	0	0	copy fasta	NOS3	chr7	150986017	151019588
NOS3_chr7_150986017_151019588	0/0	c0005	3612	6	6	0	0	0	0	copy fasta	NOS3	chr7	150986017	151019588
NOS3_chr7_150986017_151019588	0/0	c0006	3612	5	4	1	0	0	0	copy fasta	NOS3	chr7	150986017	151019588
NOS3_chr7_150986017_151019588	0/0	c0007	3612	3	1	2	0	0	0	copy fasta	NOS3	chr7	150986017	151019588
NOS3_chr7_150986017_151019588	0/0	c0008	3612	3	0	0	2	0	1	copy fasta	NOS3	chr7	150986017	151019588
NOS3_chr7_150986017_151019588	0/0	c0009	3612	2	0	0	2	0	0	copy fasta	NOS3	chr7	150986017	151019588
NOS3_chr7_150986017_151019588	0/0	c0010	3612	2	2	0	0	0	0	copy fasta	NOS3	chr7	150986017	151019588
NOS3_chr7_150986017_151019588	0/0	c0011	3612	2	0	2	0	0	0	copy fasta	NOS3	chr7	150986017	151019588
NOS3_chr7_150986017_151019588	0/0	c0012	3612	2	0	0	2	0	0	copy fasta	NOS3	chr7	150986017	151019588
NOS3_chr7_150986017_151019588	0/0	c0013	3612	2	2	0	0	0	0	copy fasta	NOS3	chr7	150986017	151019588
NOS3_chr7_150986017_151019588	0/0	c0014	3612	1	1	0	0	0	0	copy fasta	NOS3	chr7	150986017	151019588
NOS3_chr7_150986017_151019588	0/0	c0015	3612	1	0	0	0	0	1	copy fasta	NOS3	chr7	150986017	151019588
NOS3_chr7_150986017_151019588	0/0	c0016	3612	1	0	0	1	0	0	copy fasta	NOS3	chr7	150986017	151019588
NOS3_chr7_150986017_151019588	0/0	c0017	3612	1	0	0	0	1	0	copy fasta	NOS3	chr7	150986017	151019588
NOS3_chr7_150986017_151019588	0/0	c0018	3612	1	0	0	1	0	0	copy fasta	NOS3	chr7	150986017	151019588
NOS3_chr7_150986017_151019588	0/0	c0019	3612	1	1	0	0	0	0	copy fasta	NOS3	chr7	150986017	151019588
NOS3_chr7_150986017_151019588	0/0	c0020	3612	1	0	0	0	0	1	copy fasta	NOS3	chr7	150986017	151019588
NOS3_chr7_150986017_151019588	0/0	c0021	3612	1	1	0	0	0	0	copy fasta	NOS3	chr7	150986017	151019588
NOS3_chr7_150986017_151019588	0/0	c0022	3612	1	0	0	1	0	0	copy fasta	NOS3	chr7	150986017	151019588
NOS3_chr7_150986017_151019588	0/0	c0023	3612	1	1	0	0	0	0	copy fasta	NOS3	chr7	150986017	151019588
NOS3_chr7_150986017_151019588	0/0	c0024	3612	1	1	0	0	0	0	copy fasta	NOS3	chr7	150986017	151019588
NOS3_chr7_150986017_151019588	0/0	c0025	3612	1	0	1	0	0	0	copy fasta	NOS3	chr7	150986017	151019588
NOS3_chr7_150986017_151019588	0/0	c0026	3612	1	1	0	0	0	0	copy fasta	NOS3	chr7	150986017	151019588
NOS3_chr7_150986017_151019588	0/0	c0027	3612	1	0	0	1	0	0	copy fasta	NOS3	chr7	150986017	151019588
NOS3_chr7_150986017_151019588	0/0	c0028	3612	1	0	0	1	0	0	copy fasta	NOS3	chr7	150986017	151019588
NOS3_chr7_150986017_151019588	0/0	c0029	3612	1	0	1	0	0	0	copy fasta	NOS3	chr7	150986017	151019588
NOS3_chr7_150986017_151019588	0/0	c0030	3612	1	0	0	0	0	1	copy fasta	NOS3	chr7	150986017	151019588
NOS3_chr7_150986017_151019588	0/0	c0031	3612	1	1	0	0	0	0	copy fasta	NOS3	chr7	150986017	151019588
NOS3_chr7_150986017_151019588	0/0	c0032	3612	1	1	0	0	0	0	copy fasta	NOS3	chr7	150986017	151019588
NOS3_chr7_150986017_151019588	0/0	c0033	3612	1	1	0	0	0	0	copy fasta	NOS3	chr7	150986017	151019588
NOS3_chr7_150986017_151019588	0/0	c0034	3612	1	0	1	0	0	0	copy fasta	NOS3	chr7	150986017	151019588
NOS3_chr7_150986017_151019588	0/0	c0035	3612	1	1	0	0	0	0	copy fasta	NOS3	chr7	150986017	151019588
NOS3_chr7_150986017_151019588	0/0	c0036	3612	1	1	0	0	0	0	copy fasta	NOS3	chr7	150986017	151019588
NOS3_chr7_150986017_151019588	0/0	c0037	3612	1	1	0	0	0	0	copy fasta	NOS3	chr7	150986017	151019588
NOSIP_chr19_49550468_49585556	1/1	c0001	906	268	88	55	84	10	29	copy fasta	NOSIP	chr19	49550468	49585556
NOSIP_chr19_49550468_49585556	0/0	c0002	906	23	0	3	7	2	11	copy fasta	NOSIP	chr19	49550468	49585556
NOSIP_chr19_49550468_49585556	0/0	c0003	907	12	7	4	1	0	0	copy fasta	NOSIP	chr19	49550468	49585556
NOSIP_chr19_49550468_49585556	0/0	c0004	906	1	1	0	0	0	0	copy fasta	NOSIP	chr19	49550468	49585556
NOSTRIN_chr2_168797637_168870514	0/0	c0001	1521	151	39	31	53	6	22	copy fasta	NOSTRIN	chr2	168797637	168870514
NOSTRIN_chr2_168797637_168870514	0/0	c0002	1521	49	2	4	35	0	8	copy fasta	NOSTRIN	chr2	168797637	168870514
NOSTRIN_chr2_168797637_168870514	1/0	c0003	1521	38	3	15	15	3	1	copy fasta	NOSTRIN	chr2	168797637	168870514
NOSTRIN_chr2_168797637_168870514	0/1	c0004	1521	32	6	10	5	3	7	copy fasta	NOSTRIN	chr2	168797637	168870514
NOSTRIN_chr2_168797637_168870514	0/0	c0005	1521	29	24	2	0	2	1	copy fasta	NOSTRIN	chr2	168797637	168870514
NOSTRIN_chr2_168797637_168870514	0/0	c0006	1521	8	7	1	0	0	0	copy fasta	NOSTRIN	chr2	168797637	168870514
NOSTRIN_chr2_168797637_168870514	0/0	c0007	1521	8	0	1	6	0	1	copy fasta	NOSTRIN	chr2	168797637	168870514
NOSTRIN_chr2_168797637_168870514	0/0	c0008	1521	3	3	0	0	0	0	copy fasta	NOSTRIN	chr2	168797637	168870514
NOSTRIN_chr2_168797637_168870514	0/0	c0009	1521	2	2	0	0	0	0	copy fasta	NOSTRIN	chr2	168797637	168870514
NOSTRIN_chr2_168797637_168870514	0/0	c0010	1521	2	2	0	0	0	0	copy fasta	NOSTRIN	chr2	168797637	168870514