JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	chapid	clen	total	AFR	AMR	EAS	EUR	SAS	cseq	genename	chr	start	end
NRAP_chr10_113583714_113669041	0/0	c0024	5193	4	0	0	4	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	c0025	5193	3	0	0	2	1	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	c0026	5193	3	1	0	2	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	c0027	5193	3	0	0	3	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	c0028	5193	3	3	0	0	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	c0029	5193	3	3	0	0	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	c0030	5193	3	0	0	2	0	1	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	c0031	5193	3	0	0	3	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	c0032	5193	2	2	0	0	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	c0033	5193	2	2	0	0	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	c0034	5193	2	2	0	0	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	c0035	5193	2	0	1	0	1	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	c0036	5193	2	1	1	0	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	c0037	5193	2	0	0	0	0	2	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	c0038	5193	2	2	0	0	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	c0039	5193	2	0	0	2	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	c0040	5193	2	0	0	0	0	2	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	c0041	5193	2	2	0	0	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	c0042	5193	2	2	0	0	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	c0043	5193	2	2	0	0	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	c0044	5193	2	0	0	1	1	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	c0045	5193	2	0	0	1	1	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	c0046	5193	2	0	0	2	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	c0047	5193	2	2	0	0	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	c0048	5193	1	1	0	0	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	c0049	5193	1	1	0	0	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	c0050	5193	1	1	0	0	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	c0051	5193	1	1	0	0	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	c0052	5193	1	0	0	1	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	c0053	5193	1	0	0	1	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	c0054	5193	1	0	0	1	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	c0055	5193	1	0	0	0	1	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	c0056	5193	1	0	0	1	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	c0057	5193	1	0	1	0	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	c0058	5193	1	0	1	0	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	c0059	5193	1	0	0	0	1	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	c0060	5193	1	0	0	0	0	1	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	c0061	5193	1	0	1	0	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	c0062	5193	1	1	0	0	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	c0063	5193	1	1	0	0	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	c0064	5193	1	0	0	1	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	c0065	5193	1	0	0	1	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	c0066	5193	1	0	1	0	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	c0067	5193	1	0	0	0	0	1	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	c0068	5193	1	0	1	0	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	c0069	5193	1	0	0	0	0	1	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	c0070	5193	1	1	0	0	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	c0071	5176	1	1	0	0	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	c0072	5176	1	1	0	0	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	c0073	5176	1	1	0	0	0	0	copy fasta	NRAP	chr10	113583714	113669041