JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	chapid	clen	total	AFR	AMR	EAS	EUR	SAS	cseq	genename	chr	start	end
NRAP_chr10_113583714_113669041	0/0	c0074	5193	1	1	0	0	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	c0075	5193	1	1	0	0	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	c0076	5193	1	0	0	0	0	1	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	c0077	5193	1	1	0	0	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	c0078	5193	1	0	1	0	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	c0079	5193	1	0	0	1	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	c0080	5193	1	0	0	0	0	1	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	c0081	5193	1	0	0	0	0	1	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	c0082	5193	1	0	0	0	0	1	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	c0083	5193	1	0	1	0	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	c0084	5193	1	1	0	0	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	c0085	5193	1	1	0	0	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	c0086	5193	1	0	0	1	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	c0087	5193	1	0	0	1	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	c0088	5193	1	0	0	1	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	c0089	5193	1	0	0	1	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	c0090	5193	1	0	1	0	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	c0091	5193	1	0	0	1	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	c0092	5193	1	0	0	1	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	c0093	5193	1	0	1	0	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/1	c0094	5193	1	0	0	0	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	c0095	5193	1	1	0	0	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	c0096	5193	1	0	0	1	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	c0097	5193	1	1	0	0	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	c0098	5193	1	0	0	1	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	c0099	5193	1	0	0	0	1	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	c0100	5193	1	1	0	0	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	c0101	5193	1	0	1	0	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	c0102	5193	1	0	0	1	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	c0103	5193	1	0	0	0	1	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	c0104	5193	1	0	0	1	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	c0105	5193	1	0	1	0	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	c0106	5193	1	0	1	0	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	c0107	5193	1	0	1	0	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	c0108	5193	1	0	0	1	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	c0109	5193	1	0	0	1	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	c0110	5193	1	0	0	1	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	c0111	5193	1	0	1	0	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	c0112	5193	1	1	0	0	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	c0113	5193	1	1	0	0	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	c0114	5176	1	1	0	0	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	c0115	5176	1	1	0	0	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRARP_chr9_137294631_137307271	1/1	c0001	345	357	97	70	130	16	42	copy fasta	NRARP	chr9	137294631	137307271
NRARP_chr9_137294631_137307271	0/0	c0002	345	1	1	0	0	0	0	copy fasta	NRARP	chr9	137294631	137307271
NRAS_chr1_114699469_114721771	1/1	c0001	570	375	97	68	155	14	39	copy fasta	NRAS	chr1	114699469	114721771
NRAS_chr1_114699469_114721771	0/0	c0002	570	1	0	0	0	0	1	copy fasta	NRAS	chr1	114699469	114721771
NRAS_chr1_114699469_114721771	0/0	c0003	570	1	0	0	1	0	0	copy fasta	NRAS	chr1	114699469	114721771
NRAS_chr1_114699469_114721771	0/0	c0004	570	1	1	0	0	0	0	copy fasta	NRAS	chr1	114699469	114721771
NRBF2_chr10_63128328_63160024	1/1	c0001	864	347	51	71	165	16	42	copy fasta	NRBF2	chr10	63128328	63160024
NRBF2_chr10_63128328_63160024	0/0	c0002	864	34	31	3	0	0	0	copy fasta	NRBF2	chr10	63128328	63160024