JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	chapid	clen	total	AFR	AMR	EAS	EUR	SAS	cseq	genename	chr	start	end
PARP15_chr3_122572650_122644047	0/0	c0019	2037	2	2	0	0	0	0	copy fasta	PARP15	chr3	122572650	122644047
PARP15_chr3_122572650_122644047	0/0	c0020	2037	1	1	0	0	0	0	copy fasta	PARP15	chr3	122572650	122644047
PARP15_chr3_122572650_122644047	0/0	c0021	2037	1	0	0	1	0	0	copy fasta	PARP15	chr3	122572650	122644047
PARP15_chr3_122572650_122644047	0/0	c0022	2037	1	1	0	0	0	0	copy fasta	PARP15	chr3	122572650	122644047
PARP15_chr3_122572650_122644047	0/0	c0023	2037	1	0	1	0	0	0	copy fasta	PARP15	chr3	122572650	122644047
PARP15_chr3_122572650_122644047	0/0	c0024	2037	1	0	0	0	1	0	copy fasta	PARP15	chr3	122572650	122644047
PARP15_chr3_122572650_122644047	0/0	c0025	2037	1	0	1	0	0	0	copy fasta	PARP15	chr3	122572650	122644047
PARP15_chr3_122572650_122644047	0/0	c0026	2037	1	1	0	0	0	0	copy fasta	PARP15	chr3	122572650	122644047
PARP15_chr3_122572650_122644047	0/0	c0027	2037	1	1	0	0	0	0	copy fasta	PARP15	chr3	122572650	122644047
PARP15_chr3_122572650_122644047	0/0	c0028	2037	1	1	0	0	0	0	copy fasta	PARP15	chr3	122572650	122644047
PARP15_chr3_122572650_122644047	0/0	c0029	2037	1	1	0	0	0	0	copy fasta	PARP15	chr3	122572650	122644047
PARP15_chr3_122572650_122644047	0/0	c0030	2037	1	1	0	0	0	0	copy fasta	PARP15	chr3	122572650	122644047
PARP15_chr3_122572650_122644047	0/0	c0031	2037	1	0	1	0	0	0	copy fasta	PARP15	chr3	122572650	122644047
PARP15_chr3_122572650_122644047	0/0	c0032	2037	1	1	0	0	0	0	copy fasta	PARP15	chr3	122572650	122644047
PARP15_chr3_122572650_122644047	0/0	c0033	2037	1	1	0	0	0	0	copy fasta	PARP15	chr3	122572650	122644047
PARP15_chr3_122572650_122644047	0/0	c0034	2037	1	1	0	0	0	0	copy fasta	PARP15	chr3	122572650	122644047
PARP15_chr3_122572650_122644047	0/0	c0035	2037	1	1	0	0	0	0	copy fasta	PARP15	chr3	122572650	122644047
PARP15_chr3_122572650_122644047	0/0	c0036	2037	1	0	0	1	0	0	copy fasta	PARP15	chr3	122572650	122644047
PARP15_chr3_122572650_122644047	0/0	c0037	2037	1	0	0	1	0	0	copy fasta	PARP15	chr3	122572650	122644047
PARP15_chr3_122572650_122644047	0/0	c0038	2037	1	0	0	0	0	1	copy fasta	PARP15	chr3	122572650	122644047
PARP15_chr3_122572650_122644047	0/0	c0039	2037	1	0	0	1	0	0	copy fasta	PARP15	chr3	122572650	122644047
PARP15_chr3_122572650_122644047	0/0	c0040	2037	1	0	1	0	0	0	copy fasta	PARP15	chr3	122572650	122644047
PARP15_chr3_122572650_122644047	0/0	c0041	2037	1	1	0	0	0	0	copy fasta	PARP15	chr3	122572650	122644047
PARP15_chr3_122572650_122644047	0/0	c0042	2037	1	1	0	0	0	0	copy fasta	PARP15	chr3	122572650	122644047
PARP15_chr3_122572650_122644047	0/0	c0043	2037	1	1	0	0	0	0	copy fasta	PARP15	chr3	122572650	122644047
PARP15_chr3_122572650_122644047	0/0	c0044	2037	1	1	0	0	0	0	copy fasta	PARP15	chr3	122572650	122644047
PARP15_chr3_122572650_122644047	0/0	c0045	2037	1	1	0	0	0	0	copy fasta	PARP15	chr3	122572650	122644047
PARP15_chr3_122572650_122644047	0/0	c0046	2037	1	0	1	0	0	0	copy fasta	PARP15	chr3	122572650	122644047
PARP15_chr3_122572650_122644047	0/0	c0047	2037	1	1	0	0	0	0	copy fasta	PARP15	chr3	122572650	122644047
PARP16_chr15_65253099_65291883	1/1	c0001	969	220	62	41	87	11	17	copy fasta	PARP16	chr15	65253099	65291883
PARP16_chr15_65253099_65291883	0/0	c0002	969	89	23	23	36	3	4	copy fasta	PARP16	chr15	65253099	65291883
PARP16_chr15_65253099_65291883	0/0	c0003	969	2	0	0	2	0	0	copy fasta	PARP16	chr15	65253099	65291883
PARP16_chr15_65253099_65291883	0/0	c0004	969	2	0	2	0	0	0	copy fasta	PARP16	chr15	65253099	65291883
PARP16_chr15_65253099_65291883	0/0	c0005	969	1	0	0	0	0	1	copy fasta	PARP16	chr15	65253099	65291883
PARP16_chr15_65253099_65291883	0/0	c0006	969	1	0	0	1	0	0	copy fasta	PARP16	chr15	65253099	65291883
PARP16_chr15_65253099_65291883	0/0	c0007	969	1	1	0	0	0	0	copy fasta	PARP16	chr15	65253099	65291883
PARP1_chr1_226355691_226413093	0/1	c0001	3045	129	29	28	36	8	27	copy fasta	PARP1	chr1	226355691	226413093
PARP1_chr1_226355691_226413093	0/0	c0002	3045	92	28	13	40	4	7	copy fasta	PARP1	chr1	226355691	226413093
PARP1_chr1_226355691_226413093	0/0	c0003	3045	85	0	22	55	3	5	copy fasta	PARP1	chr1	226355691	226413093
PARP1_chr1_226355691_226413093	0/0	c0004	3045	15	0	0	15	0	0	copy fasta	PARP1	chr1	226355691	226413093
PARP1_chr1_226355691_226413093	0/0	c0005	3045	6	6	0	0	0	0	copy fasta	PARP1	chr1	226355691	226413093
PARP1_chr1_226355691_226413093	0/0	c0006	3045	5	5	0	0	0	0	copy fasta	PARP1	chr1	226355691	226413093
PARP1_chr1_226355691_226413093	0/0	c0007	3045	5	0	0	0	0	5	copy fasta	PARP1	chr1	226355691	226413093
PARP1_chr1_226355691_226413093	0/0	c0008	3045	2	0	0	2	0	0	copy fasta	PARP1	chr1	226355691	226413093
PARP1_chr1_226355691_226413093	0/0	c0009	3045	2	2	0	0	0	0	copy fasta	PARP1	chr1	226355691	226413093
PARP1_chr1_226355691_226413093	0/0	c0010	3045	2	0	0	2	0	0	copy fasta	PARP1	chr1	226355691	226413093
PARP1_chr1_226355691_226413093	0/0	c0011	3045	2	2	0	0	0	0	copy fasta	PARP1	chr1	226355691	226413093
PARP1_chr1_226355691_226413093	0/0	c0012	3045	1	1	0	0	0	0	copy fasta	PARP1	chr1	226355691	226413093
PARP1_chr1_226355691_226413093	0/0	c0013	3045	1	0	1	0	0	0	copy fasta	PARP1	chr1	226355691	226413093
PARP1_chr1_226355691_226413093	0/0	c0014	3045	1	0	0	1	0	0	copy fasta	PARP1	chr1	226355691	226413093