JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	chapid	clen	total	AFR	AMR	EUR	SAS	cseq	genename	chr	start	end
PCSK5_chr9_75885673_76367975	0/0	c0033	5664	1	1	0	0	0	copy fasta	PCSK5	chr9	75885673	76367975
PCSK5_chr9_75885673_76367975	0/0	c0034	5664	1	1	0	0	0	copy fasta	PCSK5	chr9	75885673	76367975
PCSK5_chr9_75885673_76367975	0/0	c0035	5664	1	1	0	0	0	copy fasta	PCSK5	chr9	75885673	76367975
PCSK5_chr9_75885673_76367975	0/0	c0036	5664	1	0	1	0	0	copy fasta	PCSK5	chr9	75885673	76367975
PCSK5_chr9_75885673_76367975	0/0	c0037	5664	1	1	0	0	0	copy fasta	PCSK5	chr9	75885673	76367975
PCSK5_chr9_75885673_76367975	0/0	c0038	5664	1	1	0	0	0	copy fasta	PCSK5	chr9	75885673	76367975
PCSK5_chr9_75885673_76367975	0/0	c0039	5664	1	1	0	0	0	copy fasta	PCSK5	chr9	75885673	76367975
PCSK5_chr9_75885673_76367975	0/0	c0040	5664	1	1	0	0	0	copy fasta	PCSK5	chr9	75885673	76367975
PCSK5_chr9_75885673_76367975	0/0	c0041	5664	1	1	0	0	0	copy fasta	PCSK5	chr9	75885673	76367975
PCSK5_chr9_75885673_76367975	0/0	c0042	5664	1	1	0	0	0	copy fasta	PCSK5	chr9	75885673	76367975
PCSK5_chr9_75885673_76367975	0/0	c0043	5664	1	1	0	0	0	copy fasta	PCSK5	chr9	75885673	76367975
PCSK5_chr9_75885673_76367975	0/0	c0044	5664	1	1	0	0	0	copy fasta	PCSK5	chr9	75885673	76367975
PCSK5_chr9_75885673_76367975	0/0	c0045	5664	1	1	0	0	0	copy fasta	PCSK5	chr9	75885673	76367975
PCSK5_chr9_75885673_76367975	0/0	c0046	5664	1	1	0	0	0	copy fasta	PCSK5	chr9	75885673	76367975
PCSK5_chr9_75885673_76367975	0/0	c0047	5664	1	1	0	0	0	copy fasta	PCSK5	chr9	75885673	76367975
PCSK5_chr9_75885673_76367975	0/0	c0048	5664	1	1	0	0	0	copy fasta	PCSK5	chr9	75885673	76367975
PCSK5_chr9_75885673_76367975	0/0	c0049	5664	1	1	0	0	0	copy fasta	PCSK5	chr9	75885673	76367975
PCSK5_chr9_75885673_76367975	0/0	c0050	5664	1	1	0	0	0	copy fasta	PCSK5	chr9	75885673	76367975
PCSK5_chr9_75885673_76367975	0/0	c0051	5664	1	1	0	0	0	copy fasta	PCSK5	chr9	75885673	76367975
PCSK5_chr9_75885673_76367975	0/0	c0052	5664	1	1	0	0	0	copy fasta	PCSK5	chr9	75885673	76367975
PCSK5_chr9_75885673_76367975	0/0	c0053	5664	1	0	0	1	0	copy fasta	PCSK5	chr9	75885673	76367975
PCSK5_chr9_75885673_76367975	0/0	c0054	5664	1	0	1	0	0	copy fasta	PCSK5	chr9	75885673	76367975
PCSK5_chr9_75885673_76367975	0/0	c0055	5664	1	1	0	0	0	copy fasta	PCSK5	chr9	75885673	76367975
PCSK5_chr9_75885673_76367975	0/0	c0056	5664	1	1	0	0	0	copy fasta	PCSK5	chr9	75885673	76367975
PCSK5_chr9_75885673_76367975	0/0	c0057	5664	1	1	0	0	0	copy fasta	PCSK5	chr9	75885673	76367975
PCSK5_chr9_75885673_76367975	0/0	c0058	5664	1	1	0	0	0	copy fasta	PCSK5	chr9	75885673	76367975
PCSK5_chr9_75885673_76367975	0/0	c0059	5664	1	0	1	0	0	copy fasta	PCSK5	chr9	75885673	76367975
PCSK5_chr9_75885673_76367975	0/0	c0060	5664	1	0	1	0	0	copy fasta	PCSK5	chr9	75885673	76367975
PCSK5_chr9_75885673_76367975	0/0	c0061	5664	1	1	0	0	0	copy fasta	PCSK5	chr9	75885673	76367975
PCSK5_chr9_75885673_76367975	0/0	c0062	5664	1	1	0	0	0	copy fasta	PCSK5	chr9	75885673	76367975
PCSK5_chr9_75885673_76367975	0/0	c0063	5664	1	0	1	0	0	copy fasta	PCSK5	chr9	75885673	76367975
PCSK5_chr9_75885673_76367975	0/0	c0064	5664	1	1	0	0	0	copy fasta	PCSK5	chr9	75885673	76367975
PCSK5_chr9_75885673_76367975	0/0	c0065	5664	1	1	0	0	0	copy fasta	PCSK5	chr9	75885673	76367975
PCSK5_chr9_75885673_76367975	0/0	c0066	5664	1	1	0	0	0	copy fasta	PCSK5	chr9	75885673	76367975
PCSK5_chr9_75885673_76367975	0/0	c0067	5664	1	1	0	0	0	copy fasta	PCSK5	chr9	75885673	76367975
PCSK5_chr9_75885673_76367975	0/0	c0068	5664	1	1	0	0	0	copy fasta	PCSK5	chr9	75885673	76367975
PCSK5_chr9_75885673_76367975	0/0	c0069	5664	1	0	1	0	0	copy fasta	PCSK5	chr9	75885673	76367975
PCSK5_chr9_75885673_76367975	0/0	c0070	5664	1	1	0	0	0	copy fasta	PCSK5	chr9	75885673	76367975
PCSK5_chr9_75885673_76367975	0/0	c0071	5664	1	1	0	0	0	copy fasta	PCSK5	chr9	75885673	76367975
PCSK5_chr9_75885673_76367975	0/0	c0072	5664	1	0	1	0	0	copy fasta	PCSK5	chr9	75885673	76367975
PCSK5_chr9_75885673_76367975	0/0	c0073	5664	1	0	1	0	0	copy fasta	PCSK5	chr9	75885673	76367975
PCSK5_chr9_75885673_76367975	0/0	c0074	5664	1	0	0	0	1	copy fasta	PCSK5	chr9	75885673	76367975
PCSK5_chr9_75885673_76367975	0/0	c0075	5664	1	1	0	0	0	copy fasta	PCSK5	chr9	75885673	76367975
PCSK5_chr9_75885673_76367975	0/0	c0076	5664	1	1	0	0	0	copy fasta	PCSK5	chr9	75885673	76367975
PCSK5_chr9_75885673_76367975	0/0	c0077	5664	1	0	1	0	0	copy fasta	PCSK5	chr9	75885673	76367975
PCSK5_chr9_75885673_76367975	0/0	c0078	5664	1	1	0	0	0	copy fasta	PCSK5	chr9	75885673	76367975
PCSK5_chr9_75885673_76367975	0/0	c0079	5664	1	1	0	0	0	copy fasta	PCSK5	chr9	75885673	76367975
PCSK5_chr9_75885673_76367975	0/0	c0080	5664	1	0	1	0	0	copy fasta	PCSK5	chr9	75885673	76367975
PCSK5_chr9_75885673_76367975	0/0	c0081	5664	1	1	0	0	0	copy fasta	PCSK5	chr9	75885673	76367975
PCSK5_chr9_75885673_76367975	0/0	c0082	5664	1	1	0	0	0	copy fasta	PCSK5	chr9	75885673	76367975