JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	chapid	clen	total	AFR	AMR	EAS	EUR	SAS	cseq	genename	chr	start	end
PLEC_chr8_143910153_143944597	0/0	c0101	13644	1	1	0	0	0	0	copy fasta	PLEC	chr8	143910153	143944597
PLEC_chr8_143910153_143944597	0/0	c0102	13644	1	1	0	0	0	0	copy fasta	PLEC	chr8	143910153	143944597
PLEC_chr8_143910153_143944597	0/0	c0103	13644	1	0	1	0	0	0	copy fasta	PLEC	chr8	143910153	143944597
PLEC_chr8_143910153_143944597	0/0	c0104	13644	1	1	0	0	0	0	copy fasta	PLEC	chr8	143910153	143944597
PLEC_chr8_143910153_143944597	0/0	c0105	13644	1	0	1	0	0	0	copy fasta	PLEC	chr8	143910153	143944597
PLEC_chr8_143910153_143944597	0/0	c0106	13644	1	0	0	1	0	0	copy fasta	PLEC	chr8	143910153	143944597
PLEC_chr8_143910153_143944597	0/0	c0107	13644	1	0	0	1	0	0	copy fasta	PLEC	chr8	143910153	143944597
PLEC_chr8_143910153_143944597	0/0	c0108	13644	1	0	0	1	0	0	copy fasta	PLEC	chr8	143910153	143944597
PLEC_chr8_143910153_143944597	0/0	c0109	13644	1	1	0	0	0	0	copy fasta	PLEC	chr8	143910153	143944597
PLEC_chr8_143910153_143944597	0/0	c0110	13644	1	1	0	0	0	0	copy fasta	PLEC	chr8	143910153	143944597
PLEC_chr8_143910153_143944597	0/0	c0111	13644	1	1	0	0	0	0	copy fasta	PLEC	chr8	143910153	143944597
PLEC_chr8_143910153_143944597	0/0	c0112	13644	1	1	0	0	0	0	copy fasta	PLEC	chr8	143910153	143944597
PLEC_chr8_143910153_143944597	0/0	c0113	13645	1	1	0	0	0	0	copy fasta	PLEC	chr8	143910153	143944597
PLEC_chr8_143910153_143944597	0/0	c0114	13644	1	1	0	0	0	0	copy fasta	PLEC	chr8	143910153	143944597
PLEC_chr8_143910153_143944597	0/0	c0115	13644	1	1	0	0	0	0	copy fasta	PLEC	chr8	143910153	143944597
PLEC_chr8_143910153_143944597	0/0	c0116	13644	1	1	0	0	0	0	copy fasta	PLEC	chr8	143910153	143944597
PLEC_chr8_143910153_143944597	0/0	c0117	13645	1	0	0	1	0	0	copy fasta	PLEC	chr8	143910153	143944597
PLEC_chr8_143910153_143944597	0/0	c0118	13644	1	0	0	1	0	0	copy fasta	PLEC	chr8	143910153	143944597
PLEC_chr8_143910153_143944597	0/0	c0119	13644	1	1	0	0	0	0	copy fasta	PLEC	chr8	143910153	143944597
PLEC_chr8_143910153_143944597	0/0	c0120	13644	1	0	0	1	0	0	copy fasta	PLEC	chr8	143910153	143944597
PLEC_chr8_143910153_143944597	0/0	c0121	13644	1	0	0	0	0	1	copy fasta	PLEC	chr8	143910153	143944597
PLEC_chr8_143910153_143944597	0/0	c0122	13644	1	0	0	1	0	0	copy fasta	PLEC	chr8	143910153	143944597
PLEC_chr8_143910153_143944597	0/0	c0123	13644	1	0	0	1	0	0	copy fasta	PLEC	chr8	143910153	143944597
PLEC_chr8_143910153_143944597	0/0	c0124	13644	1	0	1	0	0	0	copy fasta	PLEC	chr8	143910153	143944597
PLEC_chr8_143910153_143944597	0/0	c0125	13644	1	0	0	0	0	1	copy fasta	PLEC	chr8	143910153	143944597
PLEC_chr8_143910153_143944597	0/0	c0126	13644	1	0	1	0	0	0	copy fasta	PLEC	chr8	143910153	143944597
PLEC_chr8_143910153_143944597	0/0	c0127	13644	1	0	1	0	0	0	copy fasta	PLEC	chr8	143910153	143944597
PLEC_chr8_143910153_143944597	0/0	c0128	13644	1	0	0	0	0	1	copy fasta	PLEC	chr8	143910153	143944597
PLEC_chr8_143910153_143944597	0/0	c0129	13644	1	0	1	0	0	0	copy fasta	PLEC	chr8	143910153	143944597
PLEC_chr8_143910153_143944597	0/0	c0130	13644	1	0	0	1	0	0	copy fasta	PLEC	chr8	143910153	143944597
PLEC_chr8_143910153_143944597	0/0	c0131	13644	1	0	0	1	0	0	copy fasta	PLEC	chr8	143910153	143944597
PLEC_chr8_143910153_143944597	0/0	c0132	13644	1	0	0	1	0	0	copy fasta	PLEC	chr8	143910153	143944597
PLEC_chr8_143910153_143944597	0/0	c0133	13644	1	0	0	1	0	0	copy fasta	PLEC	chr8	143910153	143944597
PLEC_chr8_143910153_143944597	0/0	c0134	13644	1	0	0	0	0	1	copy fasta	PLEC	chr8	143910153	143944597
PLEC_chr8_143910153_143944597	0/0	c0135	13644	1	0	1	0	0	0	copy fasta	PLEC	chr8	143910153	143944597
PLEC_chr8_143910153_143944597	0/0	c0136	13644	1	1	0	0	0	0	copy fasta	PLEC	chr8	143910153	143944597
PLEC_chr8_143910153_143944597	0/0	c0137	13644	1	0	1	0	0	0	copy fasta	PLEC	chr8	143910153	143944597
PLEC_chr8_143910153_143944597	0/0	c0138	13644	1	0	0	1	0	0	copy fasta	PLEC	chr8	143910153	143944597
PLEC_chr8_143910153_143944597	0/0	c0139	13644	1	0	0	0	1	0	copy fasta	PLEC	chr8	143910153	143944597
PLEC_chr8_143910153_143944597	0/0	c0140	13644	1	0	0	1	0	0	copy fasta	PLEC	chr8	143910153	143944597
PLEC_chr8_143910153_143944597	0/0	c0141	13644	1	1	0	0	0	0	copy fasta	PLEC	chr8	143910153	143944597
PLEC_chr8_143910153_143944597	0/0	c0142	13644	1	0	0	1	0	0	copy fasta	PLEC	chr8	143910153	143944597
PLEC_chr8_143910153_143944597	0/0	c0143	13644	1	0	0	1	0	0	copy fasta	PLEC	chr8	143910153	143944597
PLEC_chr8_143910153_143944597	0/0	c0144	13644	1	0	0	1	0	0	copy fasta	PLEC	chr8	143910153	143944597
PLEC_chr8_143910153_143944597	0/0	c0145	13644	1	0	0	0	0	1	copy fasta	PLEC	chr8	143910153	143944597
PLEC_chr8_143910153_143944597	0/0	c0146	13644	1	0	0	0	0	1	copy fasta	PLEC	chr8	143910153	143944597
PLEC_chr8_143910153_143944597	0/0	c0147	13644	1	0	0	1	0	0	copy fasta	PLEC	chr8	143910153	143944597
PLEC_chr8_143910153_143944597	0/0	c0148	13644	1	0	0	1	0	0	copy fasta	PLEC	chr8	143910153	143944597
PLEC_chr8_143910153_143944597	0/0	c0149	13644	1	0	0	1	0	0	copy fasta	PLEC	chr8	143910153	143944597
PLEC_chr8_143910153_143944597	0/0	c0150	13644	1	0	0	1	0	0	copy fasta	PLEC	chr8	143910153	143944597