JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	chapid	clen	total	AFR	AMR	EAS	EUR	SAS	cseq	genename	chr	start	end
RYR3_chr15_33305967_33871102	0/0	c0025	14613	1	1	0	0	0	0	copy fasta	RYR3	chr15	33305967	33871102
RYR3_chr15_33305967_33871102	0/0	c0026	14613	1	1	0	0	0	0	copy fasta	RYR3	chr15	33305967	33871102
RYR3_chr15_33305967_33871102	0/0	c0027	14613	1	1	0	0	0	0	copy fasta	RYR3	chr15	33305967	33871102
RYR3_chr15_33305967_33871102	0/0	c0028	14613	1	0	0	0	0	1	copy fasta	RYR3	chr15	33305967	33871102
RYR3_chr15_33305967_33871102	0/0	c0029	14613	1	1	0	0	0	0	copy fasta	RYR3	chr15	33305967	33871102
RYR3_chr15_33305967_33871102	0/0	c0030	14613	1	0	0	0	1	0	copy fasta	RYR3	chr15	33305967	33871102
RYR3_chr15_33305967_33871102	0/0	c0031	14610	1	0	1	0	0	0	copy fasta	RYR3	chr15	33305967	33871102
RYR3_chr15_33305967_33871102	0/0	c0032	14613	1	1	0	0	0	0	copy fasta	RYR3	chr15	33305967	33871102
RYR3_chr15_33305967_33871102	0/0	c0033	14613	1	1	0	0	0	0	copy fasta	RYR3	chr15	33305967	33871102
RYR3_chr15_33305967_33871102	0/0	c0034	14613	1	0	0	0	0	1	copy fasta	RYR3	chr15	33305967	33871102
RYR3_chr15_33305967_33871102	0/0	c0035	14613	1	1	0	0	0	0	copy fasta	RYR3	chr15	33305967	33871102
RYR3_chr15_33305967_33871102	0/0	c0036	14613	1	1	0	0	0	0	copy fasta	RYR3	chr15	33305967	33871102
RYR3_chr15_33305967_33871102	0/0	c0037	14613	1	1	0	0	0	0	copy fasta	RYR3	chr15	33305967	33871102
RYR3_chr15_33305967_33871102	0/0	c0038	14613	1	1	0	0	0	0	copy fasta	RYR3	chr15	33305967	33871102
RYR3_chr15_33305967_33871102	0/0	c0039	14613	1	1	0	0	0	0	copy fasta	RYR3	chr15	33305967	33871102
RYR3_chr15_33305967_33871102	0/0	c0040	14613	1	1	0	0	0	0	copy fasta	RYR3	chr15	33305967	33871102
RYR3_chr15_33305967_33871102	0/0	c0041	14613	1	1	0	0	0	0	copy fasta	RYR3	chr15	33305967	33871102
RYR3_chr15_33305967_33871102	0/0	c0042	14613	1	0	1	0	0	0	copy fasta	RYR3	chr15	33305967	33871102
RYR3_chr15_33305967_33871102	0/0	c0043	14613	1	1	0	0	0	0	copy fasta	RYR3	chr15	33305967	33871102
RYR3_chr15_33305967_33871102	0/0	c0044	14613	1	1	0	0	0	0	copy fasta	RYR3	chr15	33305967	33871102
RYR3_chr15_33305967_33871102	0/0	c0045	14613	1	1	0	0	0	0	copy fasta	RYR3	chr15	33305967	33871102
RYR3_chr15_33305967_33871102	0/0	c0046	14613	1	1	0	0	0	0	copy fasta	RYR3	chr15	33305967	33871102
RYR3_chr15_33305967_33871102	0/0	c0047	14613	1	1	0	0	0	0	copy fasta	RYR3	chr15	33305967	33871102
RYR3_chr15_33305967_33871102	0/0	c0048	14613	1	1	0	0	0	0	copy fasta	RYR3	chr15	33305967	33871102
RYR3_chr15_33305967_33871102	0/0	c0049	14613	1	1	0	0	0	0	copy fasta	RYR3	chr15	33305967	33871102
RYR3_chr15_33305967_33871102	0/0	c0050	14613	1	1	0	0	0	0	copy fasta	RYR3	chr15	33305967	33871102
RYR3_chr15_33305967_33871102	0/0	c0051	14613	1	0	0	1	0	0	copy fasta	RYR3	chr15	33305967	33871102
RYR3_chr15_33305967_33871102	0/0	c0052	14613	1	1	0	0	0	0	copy fasta	RYR3	chr15	33305967	33871102
RYR3_chr15_33305967_33871102	1/0	c0053	14613	1	0	0	0	0	0	copy fasta	RYR3	chr15	33305967	33871102
RYR3_chr15_33305967_33871102	0/0	c0054	14613	1	1	0	0	0	0	copy fasta	RYR3	chr15	33305967	33871102
RYR3_chr15_33305967_33871102	0/0	c0055	14613	1	1	0	0	0	0	copy fasta	RYR3	chr15	33305967	33871102
RYR3_chr15_33305967_33871102	0/0	c0056	14613	1	0	0	0	0	1	copy fasta	RYR3	chr15	33305967	33871102
RYR3_chr15_33305967_33871102	0/0	c0057	14610	1	0	0	0	0	1	copy fasta	RYR3	chr15	33305967	33871102
RYR3_chr15_33305967_33871102	0/0	c0058	14613	1	1	0	0	0	0	copy fasta	RYR3	chr15	33305967	33871102
RYR3_chr15_33305967_33871102	0/0	c0059	14613	1	1	0	0	0	0	copy fasta	RYR3	chr15	33305967	33871102
RYR3_chr15_33305967_33871102	0/0	c0060	14613	1	0	0	1	0	0	copy fasta	RYR3	chr15	33305967	33871102
RYR3_chr15_33305967_33871102	0/0	c0061	14613	1	0	1	0	0	0	copy fasta	RYR3	chr15	33305967	33871102
RYR3_chr15_33305967_33871102	0/0	c0062	14613	1	1	0	0	0	0	copy fasta	RYR3	chr15	33305967	33871102
RYR3_chr15_33305967_33871102	0/0	c0063	14613	1	1	0	0	0	0	copy fasta	RYR3	chr15	33305967	33871102
RYR3_chr15_33305967_33871102	0/0	c0064	14613	1	1	0	0	0	0	copy fasta	RYR3	chr15	33305967	33871102
RYR3_chr15_33305967_33871102	0/0	c0065	14613	1	1	0	0	0	0	copy fasta	RYR3	chr15	33305967	33871102
RYR3_chr15_33305967_33871102	0/0	c0066	14613	1	1	0	0	0	0	copy fasta	RYR3	chr15	33305967	33871102
RYR3_chr15_33305967_33871102	0/0	c0067	14613	1	1	0	0	0	0	copy fasta	RYR3	chr15	33305967	33871102
RYR3_chr15_33305967_33871102	0/0	c0068	14613	1	1	0	0	0	0	copy fasta	RYR3	chr15	33305967	33871102
RYR3_chr15_33305967_33871102	0/0	c0069	14613	1	0	0	0	1	0	copy fasta	RYR3	chr15	33305967	33871102
RYR3_chr15_33305967_33871102	0/0	c0070	14613	1	0	0	1	0	0	copy fasta	RYR3	chr15	33305967	33871102
RYR3_chr15_33305967_33871102	0/0	c0071	14613	1	1	0	0	0	0	copy fasta	RYR3	chr15	33305967	33871102
RYR3_chr15_33305967_33871102	0/0	c0072	14613	1	1	0	0	0	0	copy fasta	RYR3	chr15	33305967	33871102
RYR3_chr15_33305967_33871102	0/0	c0073	14613	1	0	1	0	0	0	copy fasta	RYR3	chr15	33305967	33871102
RYR3_chr15_33305967_33871102	0/0	c0074	14613	1	1	0	0	0	0	copy fasta	RYR3	chr15	33305967	33871102