JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	chapid	clen	total	AFR	AMR	EAS	EUR	SAS	cseq	genename	chr	start	end
STAB2_chr12_103582273_103771719	0/0	c0012	7656	4	2	0	0	1	1	copy fasta	STAB2	chr12	103582273	103771719
STAB2_chr12_103582273_103771719	0/0	c0013	7656	3	0	2	1	0	0	copy fasta	STAB2	chr12	103582273	103771719
STAB2_chr12_103582273_103771719	0/0	c0014	7656	3	0	3	0	0	0	copy fasta	STAB2	chr12	103582273	103771719
STAB2_chr12_103582273_103771719	0/0	c0015	7656	3	0	1	2	0	0	copy fasta	STAB2	chr12	103582273	103771719
STAB2_chr12_103582273_103771719	0/0	c0016	7656	3	3	0	0	0	0	copy fasta	STAB2	chr12	103582273	103771719
STAB2_chr12_103582273_103771719	0/0	c0017	7656	3	0	1	2	0	0	copy fasta	STAB2	chr12	103582273	103771719
STAB2_chr12_103582273_103771719	0/0	c0018	7656	3	3	0	0	0	0	copy fasta	STAB2	chr12	103582273	103771719
STAB2_chr12_103582273_103771719	0/0	c0019	7656	3	0	1	2	0	0	copy fasta	STAB2	chr12	103582273	103771719
STAB2_chr12_103582273_103771719	0/0	c0020	7656	3	0	2	0	1	0	copy fasta	STAB2	chr12	103582273	103771719
STAB2_chr12_103582273_103771719	0/0	c0021	7656	3	3	0	0	0	0	copy fasta	STAB2	chr12	103582273	103771719
STAB2_chr12_103582273_103771719	0/0	c0022	7656	3	3	0	0	0	0	copy fasta	STAB2	chr12	103582273	103771719
STAB2_chr12_103582273_103771719	0/0	c0023	7656	3	2	1	0	0	0	copy fasta	STAB2	chr12	103582273	103771719
STAB2_chr12_103582273_103771719	0/0	c0024	7656	2	2	0	0	0	0	copy fasta	STAB2	chr12	103582273	103771719
STAB2_chr12_103582273_103771719	0/0	c0025	7656	2	1	1	0	0	0	copy fasta	STAB2	chr12	103582273	103771719
STAB2_chr12_103582273_103771719	0/0	c0026	7656	2	0	1	1	0	0	copy fasta	STAB2	chr12	103582273	103771719
STAB2_chr12_103582273_103771719	0/0	c0027	7656	2	0	2	0	0	0	copy fasta	STAB2	chr12	103582273	103771719
STAB2_chr12_103582273_103771719	0/0	c0028	7656	2	0	2	0	0	0	copy fasta	STAB2	chr12	103582273	103771719
STAB2_chr12_103582273_103771719	0/0	c0029	7656	2	0	2	0	0	0	copy fasta	STAB2	chr12	103582273	103771719
STAB2_chr12_103582273_103771719	0/0	c0030	7656	2	0	0	0	0	2	copy fasta	STAB2	chr12	103582273	103771719
STAB2_chr12_103582273_103771719	0/0	c0031	7656	2	0	0	1	0	1	copy fasta	STAB2	chr12	103582273	103771719
STAB2_chr12_103582273_103771719	0/0	c0032	7656	2	1	1	0	0	0	copy fasta	STAB2	chr12	103582273	103771719
STAB2_chr12_103582273_103771719	0/0	c0033	7656	2	0	2	0	0	0	copy fasta	STAB2	chr12	103582273	103771719
STAB2_chr12_103582273_103771719	0/0	c0034	7656	2	0	2	0	0	0	copy fasta	STAB2	chr12	103582273	103771719
STAB2_chr12_103582273_103771719	0/0	c0035	7656	2	2	0	0	0	0	copy fasta	STAB2	chr12	103582273	103771719
STAB2_chr12_103582273_103771719	0/0	c0036	7656	2	0	0	2	0	0	copy fasta	STAB2	chr12	103582273	103771719
STAB2_chr12_103582273_103771719	0/0	c0037	7656	2	0	0	2	0	0	copy fasta	STAB2	chr12	103582273	103771719
STAB2_chr12_103582273_103771719	0/0	c0038	7656	2	0	1	0	1	0	copy fasta	STAB2	chr12	103582273	103771719
STAB2_chr12_103582273_103771719	0/0	c0039	7656	2	2	0	0	0	0	copy fasta	STAB2	chr12	103582273	103771719
STAB2_chr12_103582273_103771719	0/0	c0040	7656	2	2	0	0	0	0	copy fasta	STAB2	chr12	103582273	103771719
STAB2_chr12_103582273_103771719	0/0	c0041	7656	2	1	1	0	0	0	copy fasta	STAB2	chr12	103582273	103771719
STAB2_chr12_103582273_103771719	0/0	c0042	7656	2	2	0	0	0	0	copy fasta	STAB2	chr12	103582273	103771719
STAB2_chr12_103582273_103771719	0/0	c0043	7656	2	0	1	0	0	1	copy fasta	STAB2	chr12	103582273	103771719
STAB2_chr12_103582273_103771719	0/0	c0044	7656	2	0	1	1	0	0	copy fasta	STAB2	chr12	103582273	103771719
STAB2_chr12_103582273_103771719	0/0	c0045	7656	2	0	1	1	0	0	copy fasta	STAB2	chr12	103582273	103771719
STAB2_chr12_103582273_103771719	0/0	c0046	7656	2	0	0	2	0	0	copy fasta	STAB2	chr12	103582273	103771719
STAB2_chr12_103582273_103771719	0/0	c0047	7656	1	1	0	0	0	0	copy fasta	STAB2	chr12	103582273	103771719
STAB2_chr12_103582273_103771719	0/0	c0048	7656	1	0	0	1	0	0	copy fasta	STAB2	chr12	103582273	103771719
STAB2_chr12_103582273_103771719	0/0	c0049	7656	1	1	0	0	0	0	copy fasta	STAB2	chr12	103582273	103771719
STAB2_chr12_103582273_103771719	0/0	c0050	7656	1	1	0	0	0	0	copy fasta	STAB2	chr12	103582273	103771719
STAB2_chr12_103582273_103771719	0/0	c0051	7656	1	1	0	0	0	0	copy fasta	STAB2	chr12	103582273	103771719
STAB2_chr12_103582273_103771719	0/0	c0052	7656	1	1	0	0	0	0	copy fasta	STAB2	chr12	103582273	103771719
STAB2_chr12_103582273_103771719	0/0	c0053	7656	1	1	0	0	0	0	copy fasta	STAB2	chr12	103582273	103771719
STAB2_chr12_103582273_103771719	0/0	c0054	7656	1	0	1	0	0	0	copy fasta	STAB2	chr12	103582273	103771719
STAB2_chr12_103582273_103771719	0/0	c0055	7656	1	1	0	0	0	0	copy fasta	STAB2	chr12	103582273	103771719
STAB2_chr12_103582273_103771719	0/0	c0056	7656	1	0	1	0	0	0	copy fasta	STAB2	chr12	103582273	103771719
STAB2_chr12_103582273_103771719	0/0	c0057	7656	1	0	1	0	0	0	copy fasta	STAB2	chr12	103582273	103771719
STAB2_chr12_103582273_103771719	0/0	c0058	7656	1	0	1	0	0	0	copy fasta	STAB2	chr12	103582273	103771719
STAB2_chr12_103582273_103771719	0/0	c0059	7656	1	0	0	0	1	0	copy fasta	STAB2	chr12	103582273	103771719
STAB2_chr12_103582273_103771719	0/0	c0060	7656	1	0	0	0	1	0	copy fasta	STAB2	chr12	103582273	103771719
STAB2_chr12_103582273_103771719	0/0	c0061	7656	1	0	1	0	0	0	copy fasta	STAB2	chr12	103582273	103771719