JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	chapid	clen	total	AFR	AMR	EAS	SAS	cseq	genename	chr	start	end
UMODL1_chr21_42066317_42147996	0/0	c0073	3957	1	0	1	0	0	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0074	3957	1	0	1	0	0	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0075	3957	1	0	0	1	0	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0076	3957	1	0	0	1	0	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0077	3957	1	0	0	1	0	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0078	3957	1	0	0	1	0	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0079	3957	1	0	0	1	0	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0080	3957	1	0	0	1	0	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0081	3957	1	0	0	1	0	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0082	3957	1	0	1	0	0	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0083	3957	1	0	0	1	0	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0084	3957	1	0	0	1	0	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0085	3957	1	0	0	1	0	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0086	3957	1	1	0	0	0	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0087	3957	1	1	0	0	0	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0088	3957	1	0	0	1	0	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0089	3957	1	0	0	1	0	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0090	3957	1	0	0	1	0	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0091	3957	1	0	0	0	1	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0092	3957	1	0	0	1	0	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0093	3957	1	0	1	0	0	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0094	3957	1	0	1	0	0	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0095	3961	1	0	0	1	0	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0096	3957	1	0	1	0	0	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0097	3957	1	0	0	1	0	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0098	3957	1	1	0	0	0	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0099	3957	1	0	0	0	1	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0100	3957	1	0	0	0	1	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0101	3957	1	0	0	1	0	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0102	3957	1	0	0	0	1	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0103	3957	1	0	0	1	0	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0104	3957	1	0	0	1	0	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0105	3957	1	0	0	1	0	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0106	3957	1	1	0	0	0	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0107	3974	1	1	0	0	0	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0108	3957	1	1	0	0	0	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0109	3957	1	1	0	0	0	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0110	3957	1	0	0	1	0	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0111	3957	1	1	0	0	0	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0112	3961	1	0	0	1	0	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0113	3957	1	1	0	0	0	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0114	3957	1	1	0	0	0	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0115	3957	1	1	0	0	0	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0116	3957	1	1	0	0	0	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0117	3957	1	1	0	0	0	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0118	3957	1	1	0	0	0	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0119	3957	1	1	0	0	0	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0120	3957	1	1	0	0	0	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0121	3957	1	1	0	0	0	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0122	3957	1	1	0	0	0	copy fasta	UMODL1	chr21	42066317	42147996