JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	chapid	clen	total	AFR	AMR	EAS	EUR	SAS	cseq	genename	chr	start	end
UMODL1_chr21_42066317_42147996	0/0	c0123	3957	1	0	1	0	0	0	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0124	3957	1	1	0	0	0	0	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0125	3957	1	0	0	1	0	0	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0126	3957	1	0	0	1	0	0	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0127	3957	1	0	0	1	0	0	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0128	3957	1	0	0	0	0	1	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0129	3957	1	1	0	0	0	0	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0130	3957	1	0	1	0	0	0	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0131	3957	1	0	0	1	0	0	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0132	3957	1	1	0	0	0	0	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0133	3957	1	1	0	0	0	0	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0134	3957	1	0	0	0	0	1	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0135	3957	1	0	1	0	0	0	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0136	3957	1	0	0	0	1	0	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0137	3957	1	0	0	0	0	1	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0138	3957	1	0	0	1	0	0	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0139	3957	1	1	0	0	0	0	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0140	3957	1	0	0	0	0	1	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0141	3957	1	1	0	0	0	0	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0142	3957	1	0	1	0	0	0	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0143	3957	1	0	1	0	0	0	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0144	3957	1	1	0	0	0	0	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0145	3957	1	1	0	0	0	0	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0146	3957	1	0	0	0	1	0	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0147	3957	1	0	0	0	0	1	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0148	3957	1	1	0	0	0	0	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0149	3957	1	0	1	0	0	0	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0150	3957	1	1	0	0	0	0	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0151	3957	1	0	0	0	0	1	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0152	3957	1	0	0	1	0	0	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0153	3957	1	1	0	0	0	0	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0154	3957	1	1	0	0	0	0	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0155	3957	1	0	0	0	1	0	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0156	3957	1	1	0	0	0	0	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0157	3957	1	1	0	0	0	0	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0158	3957	1	1	0	0	0	0	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0159	3957	1	1	0	0	0	0	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0160	3957	1	0	0	0	0	1	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0161	3957	1	0	1	0	0	0	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0162	3957	1	0	1	0	0	0	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0163	3957	1	0	0	0	0	1	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0164	3957	1	1	0	0	0	0	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0165	3957	1	1	0	0	0	0	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0166	3957	1	1	0	0	0	0	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0167	3957	1	1	0	0	0	0	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0168	3957	1	1	0	0	0	0	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0169	3957	1	1	0	0	0	0	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0170	3957	1	1	0	0	0	0	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0171	3957	1	1	0	0	0	0	copy fasta	UMODL1	chr21	42066317	42147996
UMODL1_chr21_42066317_42147996	0/0	c0172	3957	1	1	0	0	0	0	copy fasta	UMODL1	chr21	42066317	42147996