JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	chapid	clen	total	AFR	AMR	EAS	EUR	SAS	cseq	genename	chr	start	end
VWF_chr12_5943877_6129670	0/0	c0092	8442	1	0	0	1	0	0	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	c0093	8442	1	0	0	0	0	1	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	c0094	8442	1	1	0	0	0	0	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	c0095	8442	1	1	0	0	0	0	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	c0096	8442	1	0	0	0	0	1	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	c0097	8442	1	1	0	0	0	0	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	c0098	8442	1	0	1	0	0	0	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	c0099	8442	1	0	1	0	0	0	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	c0100	8442	1	1	0	0	0	0	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	c0101	8442	1	1	0	0	0	0	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	c0102	8442	1	0	0	0	0	1	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	c0103	8442	1	0	0	1	0	0	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	c0104	8442	1	0	0	1	0	0	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	c0105	8442	1	1	0	0	0	0	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	c0106	8442	1	1	0	0	0	0	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	c0107	8442	1	0	1	0	0	0	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	c0108	8442	1	0	1	0	0	0	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	c0109	8442	1	0	1	0	0	0	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	c0110	8442	1	0	0	0	0	1	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	c0111	8442	1	0	0	0	0	1	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	c0112	8442	1	0	1	0	0	0	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	c0113	8442	1	1	0	0	0	0	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	c0114	8442	1	1	0	0	0	0	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	c0115	8442	1	0	0	1	0	0	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	c0116	8442	1	0	1	0	0	0	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	c0117	8442	1	0	0	1	0	0	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	c0118	8442	1	0	1	0	0	0	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	c0119	8442	1	0	0	0	0	1	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/1	c0120	8442	1	0	0	0	0	0	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	c0121	8442	1	0	0	0	0	1	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	c0122	8442	1	0	0	1	0	0	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	c0123	8442	1	0	0	1	0	0	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	c0124	8442	1	0	0	0	0	1	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	c0125	8442	1	1	0	0	0	0	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	c0126	8442	1	0	1	0	0	0	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	c0127	8442	1	0	0	0	0	1	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	c0128	8442	1	0	0	0	0	1	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	c0129	8442	1	0	0	0	1	0	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	c0130	8442	1	1	0	0	0	0	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	c0131	8442	1	0	1	0	0	0	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	c0132	8442	1	0	1	0	0	0	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	c0133	8442	1	1	0	0	0	0	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	c0134	8442	1	0	0	0	0	1	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	c0135	8442	1	0	0	1	0	0	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	c0136	8442	1	1	0	0	0	0	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	c0137	8442	1	1	0	0	0	0	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	c0138	8442	1	1	0	0	0	0	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	c0139	8442	1	0	0	1	0	0	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	c0140	8442	1	0	0	1	0	0	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	c0141	8442	1	0	0	1	0	0	copy fasta	VWF	chr12	5943877	6129670