Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	chapid	clen	total	AFR	AMR	EAS	EUR	SAS	cseq	genename	chr	start	end
ACACB_chr12_109111587_109273226	0/0	c0090	7377	1	0	0	1	0	0	copy fasta	ACACB	chr12	109111587	109273226
ACACB_chr12_109111587_109273226	0/0	c0091	7377	1	0	0	1	0	0	copy fasta	ACACB	chr12	109111587	109273226
ACACB_chr12_109111587_109273226	0/0	c0092	7377	1	1	0	0	0	0	copy fasta	ACACB	chr12	109111587	109273226
ACACB_chr12_109111587_109273226	0/0	c0093	7377	1	0	0	1	0	0	copy fasta	ACACB	chr12	109111587	109273226
ACACB_chr12_109111587_109273226	0/0	c0094	7377	1	1	0	0	0	0	copy fasta	ACACB	chr12	109111587	109273226
ACACB_chr12_109111587_109273226	0/0	c0095	7377	1	1	0	0	0	0	copy fasta	ACACB	chr12	109111587	109273226
ACACB_chr12_109111587_109273226	0/0	c0096	7377	1	1	0	0	0	0	copy fasta	ACACB	chr12	109111587	109273226
ACACB_chr12_109111587_109273226	0/0	c0097	7377	1	0	1	0	0	0	copy fasta	ACACB	chr12	109111587	109273226
ACACB_chr12_109111587_109273226	0/0	c0098	7377	1	1	0	0	0	0	copy fasta	ACACB	chr12	109111587	109273226
ACACB_chr12_109111587_109273226	0/0	c0099	7377	1	0	0	1	0	0	copy fasta	ACACB	chr12	109111587	109273226
ACACB_chr12_109111587_109273226	0/0	c0100	7377	1	0	0	1	0	0	copy fasta	ACACB	chr12	109111587	109273226
ACACB_chr12_109111587_109273226	0/0	c0101	7377	1	1	0	0	0	0	copy fasta	ACACB	chr12	109111587	109273226
ACACB_chr12_109111587_109273226	0/0	c0102	7377	1	1	0	0	0	0	copy fasta	ACACB	chr12	109111587	109273226
ACACB_chr12_109111587_109273226	0/0	c0103	7377	1	1	0	0	0	0	copy fasta	ACACB	chr12	109111587	109273226
ACACB_chr12_109111587_109273226	0/0	c0104	7377	1	1	0	0	0	0	copy fasta	ACACB	chr12	109111587	109273226
ACACB_chr12_109111587_109273226	0/0	c0105	7377	1	1	0	0	0	0	copy fasta	ACACB	chr12	109111587	109273226
ACACB_chr12_109111587_109273226	0/0	c0106	7377	1	1	0	0	0	0	copy fasta	ACACB	chr12	109111587	109273226
ACACB_chr12_109111587_109273226	0/0	c0107	7377	1	1	0	0	0	0	copy fasta	ACACB	chr12	109111587	109273226
ACACB_chr12_109111587_109273226	0/0	c0108	7377	1	0	0	0	0	1	copy fasta	ACACB	chr12	109111587	109273226
ACACB_chr12_109111587_109273226	0/0	c0109	7377	1	0	0	0	0	1	copy fasta	ACACB	chr12	109111587	109273226
ACACB_chr12_109111587_109273226	0/0	c0110	7377	1	0	1	0	0	0	copy fasta	ACACB	chr12	109111587	109273226
ACACB_chr12_109111587_109273226	0/0	c0111	7377	1	0	1	0	0	0	copy fasta	ACACB	chr12	109111587	109273226
ACACB_chr12_109111587_109273226	0/0	c0112	7377	1	0	0	1	0	0	copy fasta	ACACB	chr12	109111587	109273226
ACACB_chr12_109111587_109273226	0/0	c0113	7377	1	1	0	0	0	0	copy fasta	ACACB	chr12	109111587	109273226
ACACB_chr12_109111587_109273226	0/0	c0114	7377	1	1	0	0	0	0	copy fasta	ACACB	chr12	109111587	109273226
ACACB_chr12_109111587_109273226	0/0	c0115	7377	1	0	0	1	0	0	copy fasta	ACACB	chr12	109111587	109273226
ACACB_chr12_109111587_109273226	0/0	c0116	7377	1	0	0	0	0	1	copy fasta	ACACB	chr12	109111587	109273226
ACACB_chr12_109111587_109273226	0/0	c0117	7377	1	0	0	0	0	1	copy fasta	ACACB	chr12	109111587	109273226
ACACB_chr12_109111587_109273226	0/0	c0118	7377	1	1	0	0	0	0	copy fasta	ACACB	chr12	109111587	109273226
ACACB_chr12_109111587_109273226	0/0	c0119	7377	1	1	0	0	0	0	copy fasta	ACACB	chr12	109111587	109273226
ACACB_chr12_109111587_109273226	0/0	c0120	7377	1	0	1	0	0	0	copy fasta	ACACB	chr12	109111587	109273226
ACACB_chr12_109111587_109273226	0/0	c0121	7377	1	1	0	0	0	0	copy fasta	ACACB	chr12	109111587	109273226
ACACB_chr12_109111587_109273226	0/0	c0122	7377	1	1	0	0	0	0	copy fasta	ACACB	chr12	109111587	109273226
ACACB_chr12_109111587_109273226	0/0	c0123	7377	1	1	0	0	0	0	copy fasta	ACACB	chr12	109111587	109273226
ACACB_chr12_109111587_109273226	0/0	c0124	7377	1	1	0	0	0	0	copy fasta	ACACB	chr12	109111587	109273226
ACAD10_chr12_111681053_111762099	1/1	c0001	3180	212	56	38	81	4	31	copy fasta	ACAD10	chr12	111681053	111762099
ACAD10_chr12_111681053_111762099	0/0	c0002	3180	95	16	11	68	0	0	copy fasta	ACAD10	chr12	111681053	111762099
ACAD10_chr12_111681053_111762099	0/0	c0003	3180	8	7	1	0	0	0	copy fasta	ACAD10	chr12	111681053	111762099
ACAD10_chr12_111681053_111762099	0/0	c0004	3180	6	0	2	0	2	2	copy fasta	ACAD10	chr12	111681053	111762099
ACAD10_chr12_111681053_111762099	0/0	c0005	3180	3	0	0	0	0	3	copy fasta	ACAD10	chr12	111681053	111762099
ACAD10_chr12_111681053_111762099	0/0	c0006	3180	2	2	0	0	0	0	copy fasta	ACAD10	chr12	111681053	111762099
ACAD10_chr12_111681053_111762099	0/0	c0007	3180	1	1	0	0	0	0	copy fasta	ACAD10	chr12	111681053	111762099
ACAD10_chr12_111681053_111762099	0/0	c0008	3180	1	0	0	1	0	0	copy fasta	ACAD10	chr12	111681053	111762099
ACAD10_chr12_111681053_111762099	0/0	c0009	3180	1	0	1	0	0	0	copy fasta	ACAD10	chr12	111681053	111762099
ACAD10_chr12_111681053_111762099	0/0	c0010	3180	1	1	0	0	0	0	copy fasta	ACAD10	chr12	111681053	111762099
ACAD10_chr12_111681053_111762099	0/0	c0011	3180	1	0	0	1	0	0	copy fasta	ACAD10	chr12	111681053	111762099
ACAD10_chr12_111681053_111762099	0/0	c0012	3180	1	0	0	0	0	1	copy fasta	ACAD10	chr12	111681053	111762099
ACAD10_chr12_111681053_111762099	0/0	c0013	3180	1	0	1	0	0	0	copy fasta	ACAD10	chr12	111681053	111762099
ACAD10_chr12_111681053_111762099	0/0	c0014	3180	1	0	0	0	0	1	copy fasta	ACAD10	chr12	111681053	111762099
ACAD10_chr12_111681053_111762099	0/0	c0015	3180	1	1	0	0	0	0	copy fasta	ACAD10	chr12	111681053	111762099