JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	chapid	clen	total	AFR	AMR	EAS	EUR	SAS	cseq	genename	chr	start	end
ZNF469_chr16_88377959_88445753	0/0	c0062	11863	1	1	0	0	0	0	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	c0063	11862	1	1	0	0	0	0	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	c0064	11841	1	1	0	0	0	0	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	c0065	11862	1	0	0	1	0	0	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	c0066	11862	1	1	0	0	0	0	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	c0067	11862	1	1	0	0	0	0	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	c0068	11862	1	0	0	1	0	0	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	c0069	11862	1	1	0	0	0	0	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	c0070	11862	1	1	0	0	0	0	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	c0071	11862	1	1	0	0	0	0	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	c0072	11862	1	1	0	0	0	0	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	c0073	11862	1	1	0	0	0	0	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	c0074	11862	1	1	0	0	0	0	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	c0075	11862	1	1	0	0	0	0	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	c0076	11862	1	1	0	0	0	0	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	c0077	11862	1	1	0	0	0	0	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	c0078	11862	1	1	0	0	0	0	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	c0079	11862	1	1	0	0	0	0	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	c0080	11862	1	0	0	1	0	0	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	c0081	11879	1	0	0	1	0	0	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	c0082	11862	1	0	1	0	0	0	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	c0083	11863	1	0	0	1	0	0	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	c0084	11863	1	0	0	1	0	0	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	c0085	11862	1	0	1	0	0	0	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	c0086	11862	1	0	1	0	0	0	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	c0087	11862	1	0	0	1	0	0	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	c0088	11862	1	0	1	0	0	0	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	c0089	11862	1	0	1	0	0	0	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	c0090	11862	1	0	0	1	0	0	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	c0091	11862	1	0	1	0	0	0	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	c0092	11862	1	0	1	0	0	0	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	c0093	11862	1	0	1	0	0	0	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	c0094	11862	1	0	0	0	0	1	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	c0095	11862	1	0	1	0	0	0	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	c0096	11862	1	1	0	0	0	0	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	c0097	11862	1	1	0	0	0	0	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	c0098	11863	1	0	0	0	0	1	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	c0099	11863	1	0	0	1	0	0	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	c0100	11863	1	0	0	1	0	0	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	c0101	11863	1	0	0	1	0	0	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	c0102	11862	1	1	0	0	0	0	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	c0103	11841	1	1	0	0	0	0	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	c0104	11862	1	0	0	0	0	1	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	c0105	11862	1	0	0	1	0	0	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	c0106	11862	1	0	0	1	0	0	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	c0107	11862	1	0	0	1	0	0	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	c0108	11862	1	0	1	0	0	0	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	c0109	11862	1	0	0	1	0	0	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	c0110	11862	1	0	0	0	1	0	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	c0111	11862	1	1	0	0	0	0	copy fasta	ZNF469	chr16	88377959	88445753