Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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Choose a field to sort by.

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	chapid	clen	total	AFR	AMR	EAS	EUR	SAS	cseq	genename	chr	start	end
ZNF510_chr9_96749553_96783087	0/0	c0003	2052	30	25	1	0	0	4	copy fasta	ZNF510	chr9	96749553	96783087
ZNF510_chr9_96749553_96783087	0/0	c0004	2052	19	0	0	18	0	1	copy fasta	ZNF510	chr9	96749553	96783087
ZNF510_chr9_96749553_96783087	0/0	c0005	2052	11	10	1	0	0	0	copy fasta	ZNF510	chr9	96749553	96783087
ZNF510_chr9_96749553_96783087	0/0	c0006	2052	9	8	1	0	0	0	copy fasta	ZNF510	chr9	96749553	96783087
ZNF510_chr9_96749553_96783087	0/0	c0007	2052	7	7	0	0	0	0	copy fasta	ZNF510	chr9	96749553	96783087
ZNF510_chr9_96749553_96783087	0/0	c0008	2052	4	4	0	0	0	0	copy fasta	ZNF510	chr9	96749553	96783087
ZNF510_chr9_96749553_96783087	0/0	c0009	2052	3	2	1	0	0	0	copy fasta	ZNF510	chr9	96749553	96783087
ZNF510_chr9_96749553_96783087	0/0	c0010	2052	3	3	0	0	0	0	copy fasta	ZNF510	chr9	96749553	96783087
ZNF510_chr9_96749553_96783087	0/0	c0011	2052	2	2	0	0	0	0	copy fasta	ZNF510	chr9	96749553	96783087
ZNF510_chr9_96749553_96783087	0/0	c0012	2052	2	1	1	0	0	0	copy fasta	ZNF510	chr9	96749553	96783087
ZNF510_chr9_96749553_96783087	0/0	c0013	2052	2	2	0	0	0	0	copy fasta	ZNF510	chr9	96749553	96783087
ZNF510_chr9_96749553_96783087	0/0	c0014	2052	1	0	1	0	0	0	copy fasta	ZNF510	chr9	96749553	96783087
ZNF510_chr9_96749553_96783087	0/0	c0015	2052	1	1	0	0	0	0	copy fasta	ZNF510	chr9	96749553	96783087
ZNF510_chr9_96749553_96783087	0/0	c0016	2052	1	1	0	0	0	0	copy fasta	ZNF510	chr9	96749553	96783087
ZNF510_chr9_96749553_96783087	0/0	c0017	2052	1	0	0	0	0	1	copy fasta	ZNF510	chr9	96749553	96783087
ZNF510_chr9_96749553_96783087	0/0	c0018	2052	1	1	0	0	0	0	copy fasta	ZNF510	chr9	96749553	96783087
ZNF510_chr9_96749553_96783087	0/0	c0019	2052	1	0	1	0	0	0	copy fasta	ZNF510	chr9	96749553	96783087
ZNF510_chr9_96749553_96783087	0/0	c0020	2052	1	1	0	0	0	0	copy fasta	ZNF510	chr9	96749553	96783087
ZNF510_chr9_96749553_96783087	0/0	c0021	2052	1	0	0	1	0	0	copy fasta	ZNF510	chr9	96749553	96783087
ZNF510_chr9_96749553_96783087	0/0	c0022	2052	1	0	0	1	0	0	copy fasta	ZNF510	chr9	96749553	96783087
ZNF511_chr10_133303914_133318161	1/1	c0001	759	202	49	46	65	15	25	copy fasta	ZNF511	chr10	133303914	133318161
ZNF511_chr10_133303914_133318161	0/0	c0002	759	76	41	12	16	1	6	copy fasta	ZNF511	chr10	133303914	133318161
ZNF511_chr10_133303914_133318161	0/0	c0003	759	2	2	0	0	0	0	copy fasta	ZNF511	chr10	133303914	133318161
ZNF511_chr10_133303914_133318161	0/0	c0004	759	1	0	0	0	0	1	copy fasta	ZNF511	chr10	133303914	133318161
ZNF511_chr10_133303914_133318161	0/0	c0005	759	1	0	0	1	0	0	copy fasta	ZNF511	chr10	133303914	133318161
ZNF512B_chr20_63951704_63974930	1/0	c0001	2679	197	24	30	117	11	14	copy fasta	ZNF512B	chr20	63951704	63974930
ZNF512B_chr20_63951704_63974930	0/1	c0002	2679	63	22	15	5	2	18	copy fasta	ZNF512B	chr20	63951704	63974930
ZNF512B_chr20_63951704_63974930	0/0	c0003	2679	31	20	6	0	0	5	copy fasta	ZNF512B	chr20	63951704	63974930
ZNF512B_chr20_63951704_63974930	0/0	c0004	2679	20	0	12	2	0	6	copy fasta	ZNF512B	chr20	63951704	63974930
ZNF512B_chr20_63951704_63974930	0/0	c0005	2679	6	6	0	0	0	0	copy fasta	ZNF512B	chr20	63951704	63974930
ZNF512B_chr20_63951704_63974930	0/0	c0006	2679	6	0	3	0	1	2	copy fasta	ZNF512B	chr20	63951704	63974930
ZNF512B_chr20_63951704_63974930	0/0	c0007	2679	4	0	0	4	0	0	copy fasta	ZNF512B	chr20	63951704	63974930
ZNF512B_chr20_63951704_63974930	0/0	c0008	2679	3	3	0	0	0	0	copy fasta	ZNF512B	chr20	63951704	63974930
ZNF512B_chr20_63951704_63974930	0/0	c0009	2679	3	0	0	3	0	0	copy fasta	ZNF512B	chr20	63951704	63974930
ZNF512B_chr20_63951704_63974930	0/0	c0010	2679	2	0	2	0	0	0	copy fasta	ZNF512B	chr20	63951704	63974930
ZNF512B_chr20_63951704_63974930	0/0	c0011	2679	2	2	0	0	0	0	copy fasta	ZNF512B	chr20	63951704	63974930
ZNF512B_chr20_63951704_63974930	0/0	c0012	2679	2	0	2	0	0	0	copy fasta	ZNF512B	chr20	63951704	63974930
ZNF512B_chr20_63951704_63974930	0/0	c0013	2679	1	1	0	0	0	0	copy fasta	ZNF512B	chr20	63951704	63974930
ZNF512B_chr20_63951704_63974930	0/0	c0014	2679	1	0	1	0	0	0	copy fasta	ZNF512B	chr20	63951704	63974930
ZNF512B_chr20_63951704_63974930	0/0	c0015	2679	1	0	0	0	0	1	copy fasta	ZNF512B	chr20	63951704	63974930
ZNF512B_chr20_63951704_63974930	0/0	c0016	2722	1	0	1	0	0	0	copy fasta	ZNF512B	chr20	63951704	63974930
ZNF512B_chr20_63951704_63974930	0/0	c0017	2679	1	1	0	0	0	0	copy fasta	ZNF512B	chr20	63951704	63974930
ZNF512B_chr20_63951704_63974930	0/0	c0018	2679	1	0	0	1	0	0	copy fasta	ZNF512B	chr20	63951704	63974930
ZNF512B_chr20_63951704_63974930	0/0	c0019	2679	1	0	0	1	0	0	copy fasta	ZNF512B	chr20	63951704	63974930
ZNF512B_chr20_63951704_63974930	0/0	c0020	2679	1	0	0	1	0	0	copy fasta	ZNF512B	chr20	63951704	63974930
ZNF512B_chr20_63951704_63974930	0/0	c0021	2679	1	0	0	1	0	0	copy fasta	ZNF512B	chr20	63951704	63974930
ZNF512B_chr20_63951704_63974930	0/0	c0022	2679	1	0	0	1	0	0	copy fasta	ZNF512B	chr20	63951704	63974930
ZNF512B_chr20_63951704_63974930	0/0	c0023	2679	1	0	0	1	0	0	copy fasta	ZNF512B	chr20	63951704	63974930
ZNF512B_chr20_63951704_63974930	0/0	c0024	2679	1	0	1	0	0	0	copy fasta	ZNF512B	chr20	63951704	63974930
ZNF512B_chr20_63951704_63974930	0/0	c0025	2679	1	0	0	1	0	0	copy fasta	ZNF512B	chr20	63951704	63974930