Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	chapid	clen	total	AFR	AMR	EAS	EUR	SAS	cseq	genename	chr	start	end
ADAM12_chr10_126007391_126393477	0/0	c0021	2721	2	2	0	0	0	0	copy fasta	ADAM12	chr10	126007391	126393477
ADAM12_chr10_126007391_126393477	0/0	c0022	2721	2	2	0	0	0	0	copy fasta	ADAM12	chr10	126007391	126393477
ADAM12_chr10_126007391_126393477	0/0	c0023	2721	2	0	0	2	0	0	copy fasta	ADAM12	chr10	126007391	126393477
ADAM12_chr10_126007391_126393477	0/0	c0024	2721	2	0	0	2	0	0	copy fasta	ADAM12	chr10	126007391	126393477
ADAM12_chr10_126007391_126393477	0/0	c0025	2721	2	0	2	0	0	0	copy fasta	ADAM12	chr10	126007391	126393477
ADAM12_chr10_126007391_126393477	0/0	c0026	2721	1	0	1	0	0	0	copy fasta	ADAM12	chr10	126007391	126393477
ADAM12_chr10_126007391_126393477	0/0	c0027	2721	1	1	0	0	0	0	copy fasta	ADAM12	chr10	126007391	126393477
ADAM12_chr10_126007391_126393477	0/0	c0028	2721	1	0	0	1	0	0	copy fasta	ADAM12	chr10	126007391	126393477
ADAM12_chr10_126007391_126393477	0/0	c0029	2721	1	0	0	1	0	0	copy fasta	ADAM12	chr10	126007391	126393477
ADAM12_chr10_126007391_126393477	0/0	c0030	2721	1	0	0	0	0	1	copy fasta	ADAM12	chr10	126007391	126393477
ADAM12_chr10_126007391_126393477	0/0	c0031	2721	1	1	0	0	0	0	copy fasta	ADAM12	chr10	126007391	126393477
ADAM12_chr10_126007391_126393477	0/0	c0032	2721	1	1	0	0	0	0	copy fasta	ADAM12	chr10	126007391	126393477
ADAM12_chr10_126007391_126393477	0/0	c0033	2721	1	0	0	1	0	0	copy fasta	ADAM12	chr10	126007391	126393477
ADAM12_chr10_126007391_126393477	0/0	c0034	2721	1	1	0	0	0	0	copy fasta	ADAM12	chr10	126007391	126393477
ADAM12_chr10_126007391_126393477	0/0	c0035	2721	1	1	0	0	0	0	copy fasta	ADAM12	chr10	126007391	126393477
ADAM12_chr10_126007391_126393477	0/0	c0036	2721	1	0	1	0	0	0	copy fasta	ADAM12	chr10	126007391	126393477
ADAM12_chr10_126007391_126393477	0/0	c0037	2721	1	1	0	0	0	0	copy fasta	ADAM12	chr10	126007391	126393477
ADAM12_chr10_126007391_126393477	0/0	c0038	2721	1	0	0	1	0	0	copy fasta	ADAM12	chr10	126007391	126393477
ADAM12_chr10_126007391_126393477	0/0	c0039	2721	1	1	0	0	0	0	copy fasta	ADAM12	chr10	126007391	126393477
ADAM12_chr10_126007391_126393477	0/0	c0040	2721	1	0	1	0	0	0	copy fasta	ADAM12	chr10	126007391	126393477
ADAM12_chr10_126007391_126393477	0/0	c0041	2721	1	1	0	0	0	0	copy fasta	ADAM12	chr10	126007391	126393477
ADAM12_chr10_126007391_126393477	0/0	c0042	2721	1	0	0	1	0	0	copy fasta	ADAM12	chr10	126007391	126393477
ADAM12_chr10_126007391_126393477	0/0	c0043	2721	1	1	0	0	0	0	copy fasta	ADAM12	chr10	126007391	126393477
ADAM12_chr10_126007391_126393477	0/0	c0044	2721	1	1	0	0	0	0	copy fasta	ADAM12	chr10	126007391	126393477
ADAM12_chr10_126007391_126393477	0/0	c0045	2721	1	1	0	0	0	0	copy fasta	ADAM12	chr10	126007391	126393477
ADAM12_chr10_126007391_126393477	0/0	c0046	2721	1	0	0	1	0	0	copy fasta	ADAM12	chr10	126007391	126393477
ADAM12_chr10_126007391_126393477	0/0	c0047	2721	1	0	0	1	0	0	copy fasta	ADAM12	chr10	126007391	126393477
ADAM12_chr10_126007391_126393477	0/0	c0048	2721	1	0	0	1	0	0	copy fasta	ADAM12	chr10	126007391	126393477
ADAM12_chr10_126007391_126393477	0/0	c0049	2721	1	0	0	1	0	0	copy fasta	ADAM12	chr10	126007391	126393477
ADAM12_chr10_126007391_126393477	0/0	c0050	2721	1	0	0	1	0	0	copy fasta	ADAM12	chr10	126007391	126393477
ADAM12_chr10_126007391_126393477	0/0	c0051	2721	1	1	0	0	0	0	copy fasta	ADAM12	chr10	126007391	126393477
ADAM12_chr10_126007391_126393477	0/0	c0052	2721	1	0	0	1	0	0	copy fasta	ADAM12	chr10	126007391	126393477
ADAM12_chr10_126007391_126393477	0/0	c0053	2721	1	0	0	0	0	1	copy fasta	ADAM12	chr10	126007391	126393477
ADAM12_chr10_126007391_126393477	0/0	c0054	2721	1	1	0	0	0	0	copy fasta	ADAM12	chr10	126007391	126393477
ADAM12_chr10_126007391_126393477	0/0	c0055	2721	1	1	0	0	0	0	copy fasta	ADAM12	chr10	126007391	126393477
ADAM12_chr10_126007391_126393477	0/0	c0056	2721	1	1	0	0	0	0	copy fasta	ADAM12	chr10	126007391	126393477
ADAM12_chr10_126007391_126393477	0/0	c0057	2721	1	0	0	0	0	1	copy fasta	ADAM12	chr10	126007391	126393477
ADAM12_chr10_126007391_126393477	0/0	c0058	2721	1	1	0	0	0	0	copy fasta	ADAM12	chr10	126007391	126393477
ADAM15_chr1_155046316_155067775	0/0	c0001	2592	160	21	27	84	7	21	copy fasta	ADAM15	chr1	155046316	155067775
ADAM15_chr1_155046316_155067775	0/1	c0002	2592	45	23	12	0	3	6	copy fasta	ADAM15	chr1	155046316	155067775
ADAM15_chr1_155046316_155067775	0/0	c0003	2592	29	12	6	0	4	7	copy fasta	ADAM15	chr1	155046316	155067775
ADAM15_chr1_155046316_155067775	0/0	c0004	2592	20	4	4	2	1	9	copy fasta	ADAM15	chr1	155046316	155067775
ADAM15_chr1_155046316_155067775	1/0	c0005	2592	17	13	2	0	0	1	copy fasta	ADAM15	chr1	155046316	155067775
ADAM15_chr1_155046316_155067775	0/0	c0006	2592	11	11	0	0	0	0	copy fasta	ADAM15	chr1	155046316	155067775
ADAM15_chr1_155046316_155067775	0/0	c0007	2592	9	1	6	1	0	1	copy fasta	ADAM15	chr1	155046316	155067775
ADAM15_chr1_155046316_155067775	0/0	c0008	2592	9	0	3	6	0	0	copy fasta	ADAM15	chr1	155046316	155067775
ADAM15_chr1_155046316_155067775	0/0	c0009	2592	8	7	0	1	0	0	copy fasta	ADAM15	chr1	155046316	155067775
ADAM15_chr1_155046316_155067775	0/0	c0010	2592	3	0	3	0	0	0	copy fasta	ADAM15	chr1	155046316	155067775
ADAM15_chr1_155046316_155067775	0/0	c0011	2592	2	0	0	2	0	0	copy fasta	ADAM15	chr1	155046316	155067775
ADAM15_chr1_155046316_155067775	0/0	c0012	2592	2	0	0	0	0	2	copy fasta	ADAM15	chr1	155046316	155067775