Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
AARS1_chr16_70247298_70294506	0/0	g0350	1	1	0	0	0	0	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	0/0	g0351	1	1	0	0	0	0	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	0/0	g0352	1	1	0	0	0	0	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	0/0	g0353	1	1	0	0	0	0	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	0/0	g0354	1	1	0	0	0	0	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	0/0	g0355	1	1	0	0	0	0	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	0/0	g0356	1	1	0	0	0	0	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	0/0	g0357	1	1	0	0	0	0	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	0/0	g0358	1	1	0	0	0	0	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	0/0	g0359	1	1	0	0	0	0	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	0/0	g0360	1	0	0	1	0	0	AARS1	chr16	70247298	70294506
AARS2_chr6_44293731_44318347	0/0	g0001	84	7	23	41	3	10	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	0/0	g0002	55	0	6	47	0	2	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	0/0	g0003	36	0	1	35	0	0	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	0/0	g0004	17	1	11	2	3	0	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	0/0	g0005	12	0	0	12	0	0	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	0/0	g0006	10	4	3	0	0	3	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	0/0	g0007	9	9	0	0	0	0	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	0/0	g0008	9	1	1	4	2	1	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	0/0	g0009	8	2	2	0	0	4	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	0/0	g0010	7	6	1	0	0	0	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	0/0	g0011	6	6	0	0	0	0	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	0/0	g0012	5	4	1	0	0	0	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	0/0	g0013	5	5	0	0	0	0	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	0/0	g0014	4	4	0	0	0	0	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	0/0	g0015	4	0	0	4	0	0	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	0/0	g0016	4	0	0	4	0	0	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	1/0	g0017	4	3	0	0	0	0	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	0/0	g0018	4	4	0	0	0	0	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	0/0	g0019	4	0	1	0	3	0	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	0/0	g0020	3	0	1	0	2	0	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	0/0	g0021	3	0	0	3	0	0	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	0/0	g0022	3	2	1	0	0	0	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	0/0	g0023	3	1	0	1	0	1	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	0/0	g0024	3	3	0	0	0	0	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	0/0	g0025	3	3	0	0	0	0	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	0/0	g0026	3	0	0	3	0	0	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	0/0	g0027	3	0	0	3	0	0	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	0/0	g0028	2	0	0	0	0	2	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	0/0	g0029	2	0	0	0	2	0	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	0/0	g0030	2	2	0	0	0	0	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	0/0	g0031	2	2	0	0	0	0	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	0/0	g0032	2	0	0	2	0	0	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	0/0	g0033	2	2	0	0	0	0	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	0/0	g0034	2	1	1	0	0	0	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	0/0	g0035	2	0	0	2	0	0	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	0/0	g0036	2	0	0	0	0	2	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	0/0	g0037	2	2	0	0	0	0	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	0/0	g0038	2	0	2	0	0	0	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	0/0	g0039	2	0	2	0	0	0	AARS2	chr6	44293731	44318347