JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
CD163_chr12_7465811_7508777	0/0	g0306	1	0	1	0	0	0	CD163	chr12	7465811	7508777
CD163_chr12_7465811_7508777	0/0	g0307	1	0	1	0	0	0	CD163	chr12	7465811	7508777
CD163_chr12_7465811_7508777	0/0	g0308	1	0	0	0	0	1	CD163	chr12	7465811	7508777
CD163_chr12_7465811_7508777	0/0	g0309	1	0	0	0	0	1	CD163	chr12	7465811	7508777
CD163_chr12_7465811_7508777	0/0	g0310	1	0	0	1	0	0	CD163	chr12	7465811	7508777
CD163_chr12_7465811_7508777	0/0	g0311	1	0	0	0	0	1	CD163	chr12	7465811	7508777
CD163_chr12_7465811_7508777	0/0	g0312	1	0	0	1	0	0	CD163	chr12	7465811	7508777
CD163_chr12_7465811_7508777	0/0	g0313	1	0	0	1	0	0	CD163	chr12	7465811	7508777
CD163_chr12_7465811_7508777	0/0	g0314	1	0	0	1	0	0	CD163	chr12	7465811	7508777
CD163_chr12_7465811_7508777	0/0	g0315	1	0	0	1	0	0	CD163	chr12	7465811	7508777
CD163_chr12_7465811_7508777	0/0	g0316	1	0	0	1	0	0	CD163	chr12	7465811	7508777
CD163_chr12_7465811_7508777	0/0	g0317	1	0	0	1	0	0	CD163	chr12	7465811	7508777
CD163_chr12_7465811_7508777	0/0	g0318	1	0	0	1	0	0	CD163	chr12	7465811	7508777
CD163_chr12_7465811_7508777	0/0	g0319	1	0	0	1	0	0	CD163	chr12	7465811	7508777
CD163_chr12_7465811_7508777	0/0	g0320	1	0	0	1	0	0	CD163	chr12	7465811	7508777
CD163_chr12_7465811_7508777	0/0	g0321	1	0	1	0	0	0	CD163	chr12	7465811	7508777
CD163_chr12_7465811_7508777	0/0	g0322	1	0	1	0	0	0	CD163	chr12	7465811	7508777
CD163_chr12_7465811_7508777	0/0	g0323	1	0	1	0	0	0	CD163	chr12	7465811	7508777
CD163_chr12_7465811_7508777	0/0	g0324	1	0	0	0	0	1	CD163	chr12	7465811	7508777
CD163_chr12_7465811_7508777	0/0	g0325	1	0	0	1	0	0	CD163	chr12	7465811	7508777
CD163_chr12_7465811_7508777	0/0	g0326	1	0	0	1	0	0	CD163	chr12	7465811	7508777
CD163_chr12_7465811_7508777	0/0	g0327	1	0	0	0	0	1	CD163	chr12	7465811	7508777
CD163_chr12_7465811_7508777	0/0	g0328	1	0	0	1	0	0	CD163	chr12	7465811	7508777
CD163_chr12_7465811_7508777	0/0	g0329	1	0	0	0	0	1	CD163	chr12	7465811	7508777
CD163_chr12_7465811_7508777	0/0	g0330	1	0	0	0	0	1	CD163	chr12	7465811	7508777
CD163_chr12_7465811_7508777	0/0	g0331	1	0	0	1	0	0	CD163	chr12	7465811	7508777
CD163_chr12_7465811_7508777	0/0	g0332	1	0	0	1	0	0	CD163	chr12	7465811	7508777
CD163_chr12_7465811_7508777	0/0	g0333	1	0	1	0	0	0	CD163	chr12	7465811	7508777
CD163_chr12_7465811_7508777	0/0	g0334	1	0	1	0	0	0	CD163	chr12	7465811	7508777
CD163_chr12_7465811_7508777	0/0	g0335	1	0	0	0	1	0	CD163	chr12	7465811	7508777
CD163_chr12_7465811_7508777	0/0	g0336	1	0	0	1	0	0	CD163	chr12	7465811	7508777
CD163_chr12_7465811_7508777	0/0	g0337	1	0	0	1	0	0	CD163	chr12	7465811	7508777
CD163_chr12_7465811_7508777	0/0	g0338	1	0	0	1	0	0	CD163	chr12	7465811	7508777
CD163_chr12_7465811_7508777	0/0	g0339	1	0	0	1	0	0	CD163	chr12	7465811	7508777
CD163_chr12_7465811_7508777	0/0	g0340	1	0	0	1	0	0	CD163	chr12	7465811	7508777
CD163_chr12_7465811_7508777	0/0	g0341	1	0	0	1	0	0	CD163	chr12	7465811	7508777
CD163_chr12_7465811_7508777	0/0	g0342	1	0	0	1	0	0	CD163	chr12	7465811	7508777
CD163_chr12_7465811_7508777	0/0	g0343	1	1	0	0	0	0	CD163	chr12	7465811	7508777
CD164L2_chr1_27374176_27388333	0/1	g0001	186	25	52	71	8	29	CD164L2	chr1	27374176	27388333
CD164L2_chr1_27374176_27388333	0/0	g0002	66	5	1	54	0	6	CD164L2	chr1	27374176	27388333
CD164L2_chr1_27374176_27388333	0/0	g0003	21	16	3	0	1	1	CD164L2	chr1	27374176	27388333
CD164L2_chr1_27374176_27388333	0/0	g0004	11	8	3	0	0	0	CD164L2	chr1	27374176	27388333
CD164L2_chr1_27374176_27388333	1/0	g0005	8	6	1	0	0	0	CD164L2	chr1	27374176	27388333
CD164L2_chr1_27374176_27388333	0/0	g0006	6	1	0	5	0	0	CD164L2	chr1	27374176	27388333
CD164L2_chr1_27374176_27388333	0/0	g0007	5	5	0	0	0	0	CD164L2	chr1	27374176	27388333
CD164L2_chr1_27374176_27388333	0/0	g0008	4	4	0	0	0	0	CD164L2	chr1	27374176	27388333
CD164L2_chr1_27374176_27388333	0/0	g0009	3	3	0	0	0	0	CD164L2	chr1	27374176	27388333
CD164L2_chr1_27374176_27388333	0/0	g0010	3	3	0	0	0	0	CD164L2	chr1	27374176	27388333
CD164L2_chr1_27374176_27388333	0/0	g0011	3	3	0	0	0	0	CD164L2	chr1	27374176	27388333
CD164L2_chr1_27374176_27388333	0/0	g0012	2	2	0	0	0	0	CD164L2	chr1	27374176	27388333