JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
CD207_chr2_70825211_70840816	0/0	g0097	1	0	0	0	0	1	CD207	chr2	70825211	70840816
CD207_chr2_70825211_70840816	0/0	g0098	1	0	1	0	0	0	CD207	chr2	70825211	70840816
CD207_chr2_70825211_70840816	0/0	g0099	1	0	0	1	0	0	CD207	chr2	70825211	70840816
CD207_chr2_70825211_70840816	0/0	g0100	1	0	0	0	0	1	CD207	chr2	70825211	70840816
CD207_chr2_70825211_70840816	0/0	g0101	1	0	0	1	0	0	CD207	chr2	70825211	70840816
CD207_chr2_70825211_70840816	0/0	g0102	1	0	0	1	0	0	CD207	chr2	70825211	70840816
CD207_chr2_70825211_70840816	0/0	g0103	1	0	0	1	0	0	CD207	chr2	70825211	70840816
CD207_chr2_70825211_70840816	0/0	g0104	1	0	0	1	0	0	CD207	chr2	70825211	70840816
CD207_chr2_70825211_70840816	0/0	g0105	1	0	1	0	0	0	CD207	chr2	70825211	70840816
CD207_chr2_70825211_70840816	0/0	g0106	1	0	0	1	0	0	CD207	chr2	70825211	70840816
CD207_chr2_70825211_70840816	0/0	g0107	1	0	0	1	0	0	CD207	chr2	70825211	70840816
CD207_chr2_70825211_70840816	0/0	g0108	1	0	1	0	0	0	CD207	chr2	70825211	70840816
CD207_chr2_70825211_70840816	0/0	g0109	1	1	0	0	0	0	CD207	chr2	70825211	70840816
CD207_chr2_70825211_70840816	0/0	g0110	1	0	1	0	0	0	CD207	chr2	70825211	70840816
CD207_chr2_70825211_70840816	0/0	g0111	1	0	0	1	0	0	CD207	chr2	70825211	70840816
CD207_chr2_70825211_70840816	0/0	g0112	1	1	0	0	0	0	CD207	chr2	70825211	70840816
CD207_chr2_70825211_70840816	0/0	g0113	1	0	0	1	0	0	CD207	chr2	70825211	70840816
CD207_chr2_70825211_70840816	0/0	g0114	1	0	0	1	0	0	CD207	chr2	70825211	70840816
CD207_chr2_70825211_70840816	0/0	g0115	1	0	0	1	0	0	CD207	chr2	70825211	70840816
CD207_chr2_70825211_70840816	0/0	g0116	1	0	0	1	0	0	CD207	chr2	70825211	70840816
CD207_chr2_70825211_70840816	0/0	g0117	1	0	0	0	0	1	CD207	chr2	70825211	70840816
CD207_chr2_70825211_70840816	0/0	g0118	1	0	0	0	0	1	CD207	chr2	70825211	70840816
CD207_chr2_70825211_70840816	0/0	g0119	1	0	0	1	0	0	CD207	chr2	70825211	70840816
CD207_chr2_70825211_70840816	0/0	g0120	1	0	0	1	0	0	CD207	chr2	70825211	70840816
CD207_chr2_70825211_70840816	0/0	g0121	1	0	0	1	0	0	CD207	chr2	70825211	70840816
CD207_chr2_70825211_70840816	0/0	g0122	1	0	0	1	0	0	CD207	chr2	70825211	70840816
CD207_chr2_70825211_70840816	0/0	g0123	1	1	0	0	0	0	CD207	chr2	70825211	70840816
CD207_chr2_70825211_70840816	0/0	g0124	1	0	0	0	0	1	CD207	chr2	70825211	70840816
CD207_chr2_70825211_70840816	0/0	g0125	1	0	0	1	0	0	CD207	chr2	70825211	70840816
CD207_chr2_70825211_70840816	0/0	g0126	1	0	0	1	0	0	CD207	chr2	70825211	70840816
CD207_chr2_70825211_70840816	0/0	g0127	1	0	0	1	0	0	CD207	chr2	70825211	70840816
CD207_chr2_70825211_70840816	0/0	g0128	1	1	0	0	0	0	CD207	chr2	70825211	70840816
CD209_chr19_7734993_7752534	0/0	g0001	81	3	11	53	6	8	CD209	chr19	7734993	7752534
CD209_chr19_7734993_7752534	0/0	g0002	80	6	27	22	7	18	CD209	chr19	7734993	7752534
CD209_chr19_7734993_7752534	1/0	g0003	57	1	3	52	0	0	CD209	chr19	7734993	7752534
CD209_chr19_7734993_7752534	0/0	g0004	21	0	1	17	1	2	CD209	chr19	7734993	7752534
CD209_chr19_7734993_7752534	0/0	g0005	15	0	13	2	0	0	CD209	chr19	7734993	7752534
CD209_chr19_7734993_7752534	0/0	g0006	12	1	7	4	0	0	CD209	chr19	7734993	7752534
CD209_chr19_7734993_7752534	0/0	g0007	9	9	0	0	0	0	CD209	chr19	7734993	7752534
CD209_chr19_7734993_7752534	0/0	g0008	9	4	1	3	0	1	CD209	chr19	7734993	7752534
CD209_chr19_7734993_7752534	0/0	g0009	8	8	0	0	0	0	CD209	chr19	7734993	7752534
CD209_chr19_7734993_7752534	0/0	g0010	6	0	0	6	0	0	CD209	chr19	7734993	7752534
CD209_chr19_7734993_7752534	0/0	g0011	6	5	1	0	0	0	CD209	chr19	7734993	7752534
CD209_chr19_7734993_7752534	0/0	g0012	5	0	0	5	0	0	CD209	chr19	7734993	7752534
CD209_chr19_7734993_7752534	0/0	g0013	5	5	0	0	0	0	CD209	chr19	7734993	7752534
CD209_chr19_7734993_7752534	0/0	g0014	5	5	0	0	0	0	CD209	chr19	7734993	7752534
CD209_chr19_7734993_7752534	0/0	g0015	5	0	0	5	0	0	CD209	chr19	7734993	7752534
CD209_chr19_7734993_7752534	0/0	g0016	5	4	1	0	0	0	CD209	chr19	7734993	7752534
CD209_chr19_7734993_7752534	0/0	g0017	4	0	1	1	0	2	CD209	chr19	7734993	7752534
CD209_chr19_7734993_7752534	0/0	g0018	3	0	3	0	0	0	CD209	chr19	7734993	7752534