Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
AARS2_chr6_44293731_44318347	0/0	g0090	1	0	1	0	0	0	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	0/0	g0091	1	0	0	1	0	0	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	0/0	g0092	1	0	0	1	0	0	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	0/0	g0093	1	0	0	1	0	0	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	0/0	g0094	1	0	0	1	0	0	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	0/0	g0095	1	1	0	0	0	0	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	0/0	g0096	1	0	0	1	0	0	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	0/0	g0097	1	1	0	0	0	0	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	0/0	g0098	1	0	0	1	0	0	AARS2	chr6	44293731	44318347
AARSD1_chr17_42945526_42969454	0/1	g0001	49	2	10	28	4	4	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	0/0	g0002	13	0	3	7	0	3	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	0/0	g0003	13	1	4	5	0	3	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	0/0	g0004	12	1	1	7	0	3	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	0/0	g0005	9	3	3	0	1	2	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	0/0	g0006	9	7	1	0	0	1	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	0/0	g0007	9	8	1	0	0	0	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	0/0	g0008	7	7	0	0	0	0	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	0/0	g0009	7	0	0	5	1	1	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	0/0	g0010	6	4	0	2	0	0	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	0/0	g0011	5	1	3	0	0	1	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	0/0	g0012	4	2	0	0	0	2	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	0/0	g0013	4	1	2	0	0	1	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	0/0	g0014	4	0	0	4	0	0	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	0/0	g0015	4	0	1	3	0	0	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	0/0	g0016	4	0	0	4	0	0	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	0/0	g0017	3	0	0	2	0	1	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	0/0	g0018	3	0	0	2	0	1	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	0/0	g0019	3	0	0	2	0	1	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	0/0	g0020	3	3	0	0	0	0	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	0/0	g0021	2	2	0	0	0	0	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	0/0	g0022	2	2	0	0	0	0	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	0/0	g0023	2	2	0	0	0	0	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	0/0	g0024	2	2	0	0	0	0	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	0/0	g0025	2	2	0	0	0	0	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	0/0	g0026	2	0	0	2	0	0	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	0/0	g0027	2	0	1	0	1	0	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	0/0	g0028	2	1	0	1	0	0	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	0/0	g0029	2	1	0	0	1	0	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	0/0	g0030	2	0	2	0	0	0	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	0/0	g0031	2	0	0	2	0	0	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	0/0	g0032	2	0	2	0	0	0	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	0/0	g0033	2	0	2	0	0	0	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	0/0	g0034	2	0	0	1	0	1	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	0/0	g0035	2	0	0	0	1	1	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	0/0	g0036	2	0	1	0	1	0	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	0/0	g0037	2	0	0	2	0	0	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	0/0	g0038	2	0	0	2	0	0	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	1/0	g0039	1	0	0	0	0	0	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	0/0	g0040	1	1	0	0	0	0	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	0/0	g0041	1	0	1	0	0	0	AARSD1	chr17	42945526	42969454