JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
CD302_chr2_159763628_159803208	0/0	g0348	1	0	1	0	0	0	CD302	chr2	159763628	159803208
CD302_chr2_159763628_159803208	0/0	g0349	1	0	0	1	0	0	CD302	chr2	159763628	159803208
CD302_chr2_159763628_159803208	0/0	g0350	1	0	0	1	0	0	CD302	chr2	159763628	159803208
CD302_chr2_159763628_159803208	0/0	g0351	1	0	0	1	0	0	CD302	chr2	159763628	159803208
CD302_chr2_159763628_159803208	0/0	g0352	1	0	0	1	0	0	CD302	chr2	159763628	159803208
CD302_chr2_159763628_159803208	0/0	g0353	1	0	0	0	0	1	CD302	chr2	159763628	159803208
CD302_chr2_159763628_159803208	0/0	g0354	1	0	0	1	0	0	CD302	chr2	159763628	159803208
CD302_chr2_159763628_159803208	0/0	g0355	1	0	0	1	0	0	CD302	chr2	159763628	159803208
CD302_chr2_159763628_159803208	0/0	g0356	1	0	0	1	0	0	CD302	chr2	159763628	159803208
CD302_chr2_159763628_159803208	0/0	g0357	1	0	0	1	0	0	CD302	chr2	159763628	159803208
CD302_chr2_159763628_159803208	0/0	g0358	1	0	0	1	0	0	CD302	chr2	159763628	159803208
CD302_chr2_159763628_159803208	0/0	g0359	1	0	1	0	0	0	CD302	chr2	159763628	159803208
CD302_chr2_159763628_159803208	0/0	g0360	1	0	1	0	0	0	CD302	chr2	159763628	159803208
CD302_chr2_159763628_159803208	0/0	g0361	1	0	0	0	1	0	CD302	chr2	159763628	159803208
CD302_chr2_159763628_159803208	0/0	g0362	1	0	0	1	0	0	CD302	chr2	159763628	159803208
CD302_chr2_159763628_159803208	0/0	g0363	1	0	0	1	0	0	CD302	chr2	159763628	159803208
CD302_chr2_159763628_159803208	0/0	g0364	1	1	0	0	0	0	CD302	chr2	159763628	159803208
CD302_chr2_159763628_159803208	0/0	g0365	1	0	0	1	0	0	CD302	chr2	159763628	159803208
CD302_chr2_159763628_159803208	0/0	g0366	1	0	0	1	0	0	CD302	chr2	159763628	159803208
CD302_chr2_159763628_159803208	0/0	g0367	1	0	0	1	0	0	CD302	chr2	159763628	159803208
CD302_chr2_159763628_159803208	0/0	g0368	1	0	0	1	0	0	CD302	chr2	159763628	159803208
CD302_chr2_159763628_159803208	0/0	g0369	1	0	0	1	0	0	CD302	chr2	159763628	159803208
CD302_chr2_159763628_159803208	0/0	g0370	1	0	0	1	0	0	CD302	chr2	159763628	159803208
CD302_chr2_159763628_159803208	0/0	g0371	1	0	1	0	0	0	CD302	chr2	159763628	159803208
CD302_chr2_159763628_159803208	0/0	g0372	1	0	1	0	0	0	CD302	chr2	159763628	159803208
CD302_chr2_159763628_159803208	0/0	g0373	1	0	0	1	0	0	CD302	chr2	159763628	159803208
CD302_chr2_159763628_159803208	0/0	g0374	1	0	1	0	0	0	CD302	chr2	159763628	159803208
CD302_chr2_159763628_159803208	0/0	g0375	1	0	0	1	0	0	CD302	chr2	159763628	159803208
CD302_chr2_159763628_159803208	0/0	g0376	1	0	0	1	0	0	CD302	chr2	159763628	159803208
CD302_chr2_159763628_159803208	0/0	g0377	1	0	0	1	0	0	CD302	chr2	159763628	159803208
CD302_chr2_159763628_159803208	0/0	g0378	1	0	0	1	0	0	CD302	chr2	159763628	159803208
CD302_chr2_159763628_159803208	0/0	g0379	1	0	0	1	0	0	CD302	chr2	159763628	159803208
CD302_chr2_159763628_159803208	0/0	g0380	1	0	0	1	0	0	CD302	chr2	159763628	159803208
CD302_chr2_159763628_159803208	0/0	g0381	1	0	0	1	0	0	CD302	chr2	159763628	159803208
CD302_chr2_159763628_159803208	0/0	g0382	1	0	0	1	0	0	CD302	chr2	159763628	159803208
CD302_chr2_159763628_159803208	0/0	g0383	1	0	1	0	0	0	CD302	chr2	159763628	159803208
CD320_chr19_8297127_8313358	0/0	g0001	69	1	15	37	8	8	CD320	chr19	8297127	8313358
CD320_chr19_8297127_8313358	0/0	g0002	42	1	14	25	0	2	CD320	chr19	8297127	8313358
CD320_chr19_8297127_8313358	0/0	g0003	29	1	0	27	0	1	CD320	chr19	8297127	8313358
CD320_chr19_8297127_8313358	0/0	g0004	22	2	8	9	1	2	CD320	chr19	8297127	8313358
CD320_chr19_8297127_8313358	1/0	g0005	21	2	7	10	0	1	CD320	chr19	8297127	8313358
CD320_chr19_8297127_8313358	0/1	g0006	20	3	5	1	1	9	CD320	chr19	8297127	8313358
CD320_chr19_8297127_8313358	0/0	g0007	19	9	4	5	0	1	CD320	chr19	8297127	8313358
CD320_chr19_8297127_8313358	0/0	g0008	12	10	2	0	0	0	CD320	chr19	8297127	8313358
CD320_chr19_8297127_8313358	0/0	g0009	11	0	0	11	0	0	CD320	chr19	8297127	8313358
CD320_chr19_8297127_8313358	0/0	g0010	9	2	3	1	1	2	CD320	chr19	8297127	8313358
CD320_chr19_8297127_8313358	0/0	g0011	7	0	0	0	0	7	CD320	chr19	8297127	8313358
CD320_chr19_8297127_8313358	0/0	g0012	6	6	0	0	0	0	CD320	chr19	8297127	8313358
CD320_chr19_8297127_8313358	0/0	g0013	5	0	0	5	0	0	CD320	chr19	8297127	8313358
CD320_chr19_8297127_8313358	0/0	g0014	4	0	0	4	0	0	CD320	chr19	8297127	8313358