JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
CD63_chr12_55720323_55734009	0/0	g0027	2	2	0	0	0	0	CD63	chr12	55720323	55734009
CD63_chr12_55720323_55734009	0/0	g0028	2	2	0	0	0	0	CD63	chr12	55720323	55734009
CD63_chr12_55720323_55734009	0/0	g0029	2	2	0	0	0	0	CD63	chr12	55720323	55734009
CD63_chr12_55720323_55734009	0/0	g0030	2	0	0	0	2	0	CD63	chr12	55720323	55734009
CD63_chr12_55720323_55734009	0/0	g0031	1	0	0	1	0	0	CD63	chr12	55720323	55734009
CD63_chr12_55720323_55734009	0/0	g0032	1	0	0	1	0	0	CD63	chr12	55720323	55734009
CD63_chr12_55720323_55734009	0/0	g0033	1	0	0	1	0	0	CD63	chr12	55720323	55734009
CD63_chr12_55720323_55734009	0/0	g0034	1	0	0	1	0	0	CD63	chr12	55720323	55734009
CD63_chr12_55720323_55734009	0/0	g0035	1	0	0	1	0	0	CD63	chr12	55720323	55734009
CD63_chr12_55720323_55734009	0/0	g0036	1	1	0	0	0	0	CD63	chr12	55720323	55734009
CD63_chr12_55720323_55734009	0/0	g0037	1	1	0	0	0	0	CD63	chr12	55720323	55734009
CD63_chr12_55720323_55734009	0/0	g0038	1	1	0	0	0	0	CD63	chr12	55720323	55734009
CD63_chr12_55720323_55734009	0/0	g0039	1	0	0	0	0	1	CD63	chr12	55720323	55734009
CD63_chr12_55720323_55734009	0/0	g0040	1	0	0	0	0	1	CD63	chr12	55720323	55734009
CD63_chr12_55720323_55734009	0/0	g0041	1	0	0	0	1	0	CD63	chr12	55720323	55734009
CD63_chr12_55720323_55734009	0/0	g0042	1	0	0	1	0	0	CD63	chr12	55720323	55734009
CD63_chr12_55720323_55734009	0/0	g0043	1	1	0	0	0	0	CD63	chr12	55720323	55734009
CD63_chr12_55720323_55734009	0/0	g0044	1	0	1	0	0	0	CD63	chr12	55720323	55734009
CD63_chr12_55720323_55734009	0/0	g0045	1	1	0	0	0	0	CD63	chr12	55720323	55734009
CD63_chr12_55720323_55734009	0/0	g0046	1	0	0	1	0	0	CD63	chr12	55720323	55734009
CD63_chr12_55720323_55734009	0/0	g0047	1	0	0	1	0	0	CD63	chr12	55720323	55734009
CD63_chr12_55720323_55734009	0/0	g0048	1	0	0	0	1	0	CD63	chr12	55720323	55734009
CD63_chr12_55720323_55734009	0/0	g0049	1	0	0	1	0	0	CD63	chr12	55720323	55734009
CD63_chr12_55720323_55734009	0/0	g0050	1	1	0	0	0	0	CD63	chr12	55720323	55734009
CD63_chr12_55720323_55734009	0/0	g0051	1	1	0	0	0	0	CD63	chr12	55720323	55734009
CD63_chr12_55720323_55734009	0/0	g0052	1	0	0	1	0	0	CD63	chr12	55720323	55734009
CD63_chr12_55720323_55734009	0/0	g0053	1	0	0	1	0	0	CD63	chr12	55720323	55734009
CD63_chr12_55720323_55734009	0/0	g0054	1	1	0	0	0	0	CD63	chr12	55720323	55734009
CD68_chr17_7574638_7587111	1/1	g0001	375	75	73	182	14	29	CD68	chr17	7574638	7587111
CD68_chr17_7574638_7587111	0/0	g0002	53	18	5	17	4	9	CD68	chr17	7574638	7587111
CD68_chr17_7574638_7587111	0/0	g0003	4	3	1	0	0	0	CD68	chr17	7574638	7587111
CD68_chr17_7574638_7587111	0/0	g0004	1	0	0	1	0	0	CD68	chr17	7574638	7587111
CD68_chr17_7574638_7587111	0/0	g0005	1	0	1	0	0	0	CD68	chr17	7574638	7587111
CD69_chr12_9747486_9765901	0/0	g0001	101	7	18	56	5	15	CD69	chr12	9747486	9765901
CD69_chr12_9747486_9765901	0/0	g0002	85	2	15	64	2	2	CD69	chr12	9747486	9765901
CD69_chr12_9747486_9765901	0/0	g0003	24	2	3	14	2	3	CD69	chr12	9747486	9765901
CD69_chr12_9747486_9765901	0/1	g0004	15	2	6	2	0	4	CD69	chr12	9747486	9765901
CD69_chr12_9747486_9765901	0/0	g0005	15	0	0	15	0	0	CD69	chr12	9747486	9765901
CD69_chr12_9747486_9765901	0/0	g0006	15	1	0	13	0	1	CD69	chr12	9747486	9765901
CD69_chr12_9747486_9765901	0/0	g0007	11	0	6	0	3	2	CD69	chr12	9747486	9765901
CD69_chr12_9747486_9765901	0/0	g0008	10	10	0	0	0	0	CD69	chr12	9747486	9765901
CD69_chr12_9747486_9765901	0/0	g0009	6	3	3	0	0	0	CD69	chr12	9747486	9765901
CD69_chr12_9747486_9765901	0/0	g0010	5	4	1	0	0	0	CD69	chr12	9747486	9765901
CD69_chr12_9747486_9765901	0/0	g0011	5	0	0	5	0	0	CD69	chr12	9747486	9765901
CD69_chr12_9747486_9765901	0/0	g0012	5	0	5	0	0	0	CD69	chr12	9747486	9765901
CD69_chr12_9747486_9765901	0/0	g0013	5	2	1	0	0	2	CD69	chr12	9747486	9765901
CD69_chr12_9747486_9765901	0/0	g0014	4	0	1	0	1	2	CD69	chr12	9747486	9765901
CD69_chr12_9747486_9765901	0/0	g0015	4	3	0	0	0	1	CD69	chr12	9747486	9765901
CD69_chr12_9747486_9765901	0/0	g0016	3	3	0	0	0	0	CD69	chr12	9747486	9765901
CD69_chr12_9747486_9765901	0/0	g0017	3	3	0	0	0	0	CD69	chr12	9747486	9765901