JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
CD70_chr19_6580839_6596150	0/0	g0072	1	1	0	0	0	0	CD70	chr19	6580839	6596150
CD70_chr19_6580839_6596150	0/0	g0073	1	0	0	0	0	1	CD70	chr19	6580839	6596150
CD70_chr19_6580839_6596150	0/0	g0074	1	0	0	1	0	0	CD70	chr19	6580839	6596150
CD70_chr19_6580839_6596150	1/0	g0075	1	0	0	0	0	0	CD70	chr19	6580839	6596150
CD70_chr19_6580839_6596150	0/0	g0076	1	0	1	0	0	0	CD70	chr19	6580839	6596150
CD70_chr19_6580839_6596150	0/0	g0077	1	1	0	0	0	0	CD70	chr19	6580839	6596150
CD70_chr19_6580839_6596150	0/0	g0078	1	0	0	0	0	1	CD70	chr19	6580839	6596150
CD70_chr19_6580839_6596150	0/0	g0079	1	1	0	0	0	0	CD70	chr19	6580839	6596150
CD70_chr19_6580839_6596150	0/0	g0080	1	0	0	1	0	0	CD70	chr19	6580839	6596150
CD70_chr19_6580839_6596150	0/0	g0081	1	0	0	1	0	0	CD70	chr19	6580839	6596150
CD70_chr19_6580839_6596150	0/0	g0082	1	1	0	0	0	0	CD70	chr19	6580839	6596150
CD70_chr19_6580839_6596150	0/0	g0083	1	1	0	0	0	0	CD70	chr19	6580839	6596150
CD70_chr19_6580839_6596150	0/0	g0084	1	1	0	0	0	0	CD70	chr19	6580839	6596150
CD70_chr19_6580839_6596150	0/0	g0085	1	0	0	1	0	0	CD70	chr19	6580839	6596150
CD70_chr19_6580839_6596150	0/0	g0086	1	0	0	1	0	0	CD70	chr19	6580839	6596150
CD70_chr19_6580839_6596150	0/0	g0087	1	1	0	0	0	0	CD70	chr19	6580839	6596150
CD70_chr19_6580839_6596150	0/0	g0088	1	1	0	0	0	0	CD70	chr19	6580839	6596150
CD70_chr19_6580839_6596150	0/0	g0089	1	1	0	0	0	0	CD70	chr19	6580839	6596150
CD70_chr19_6580839_6596150	0/0	g0090	1	1	0	0	0	0	CD70	chr19	6580839	6596150
CD70_chr19_6580839_6596150	0/0	g0091	1	0	0	0	0	1	CD70	chr19	6580839	6596150
CD70_chr19_6580839_6596150	0/0	g0092	1	1	0	0	0	0	CD70	chr19	6580839	6596150
CD70_chr19_6580839_6596150	0/0	g0093	1	1	0	0	0	0	CD70	chr19	6580839	6596150
CD70_chr19_6580839_6596150	0/0	g0094	1	0	0	0	1	0	CD70	chr19	6580839	6596150
CD70_chr19_6580839_6596150	0/0	g0095	1	1	0	0	0	0	CD70	chr19	6580839	6596150
CD70_chr19_6580839_6596150	0/0	g0096	1	0	0	0	0	1	CD70	chr19	6580839	6596150
CD70_chr19_6580839_6596150	0/0	g0097	1	1	0	0	0	0	CD70	chr19	6580839	6596150
CD70_chr19_6580839_6596150	0/0	g0098	1	0	1	0	0	0	CD70	chr19	6580839	6596150
CD70_chr19_6580839_6596150	0/0	g0099	1	1	0	0	0	0	CD70	chr19	6580839	6596150
CD72_chr9_35604982_35623413	0/0	g0001	89	3	12	60	2	12	CD72	chr9	35604982	35623413
CD72_chr9_35604982_35623413	0/0	g0002	84	21	17	27	5	14	CD72	chr9	35604982	35623413
CD72_chr9_35604982_35623413	0/0	g0003	53	1	5	42	1	4	CD72	chr9	35604982	35623413
CD72_chr9_35604982_35623413	1/0	g0004	53	15	20	8	3	6	CD72	chr9	35604982	35623413
CD72_chr9_35604982_35623413	0/0	g0005	11	10	1	0	0	0	CD72	chr9	35604982	35623413
CD72_chr9_35604982_35623413	0/0	g0006	4	4	0	0	0	0	CD72	chr9	35604982	35623413
CD72_chr9_35604982_35623413	0/0	g0007	4	0	2	0	1	1	CD72	chr9	35604982	35623413
CD72_chr9_35604982_35623413	0/0	g0008	4	3	1	0	0	0	CD72	chr9	35604982	35623413
CD72_chr9_35604982_35623413	0/0	g0009	4	0	0	4	0	0	CD72	chr9	35604982	35623413
CD72_chr9_35604982_35623413	0/0	g0010	4	4	0	0	0	0	CD72	chr9	35604982	35623413
CD72_chr9_35604982_35623413	0/0	g0011	3	0	1	2	0	0	CD72	chr9	35604982	35623413
CD72_chr9_35604982_35623413	0/0	g0012	3	1	2	0	0	0	CD72	chr9	35604982	35623413
CD72_chr9_35604982_35623413	0/1	g0013	3	0	1	0	1	0	CD72	chr9	35604982	35623413
CD72_chr9_35604982_35623413	0/0	g0014	3	0	0	2	0	1	CD72	chr9	35604982	35623413
CD72_chr9_35604982_35623413	0/0	g0015	3	0	0	0	1	2	CD72	chr9	35604982	35623413
CD72_chr9_35604982_35623413	0/0	g0016	3	3	0	0	0	0	CD72	chr9	35604982	35623413
CD72_chr9_35604982_35623413	0/0	g0017	3	3	0	0	0	0	CD72	chr9	35604982	35623413
CD72_chr9_35604982_35623413	0/0	g0018	3	3	0	0	0	0	CD72	chr9	35604982	35623413
CD72_chr9_35604982_35623413	0/0	g0019	3	0	0	0	0	3	CD72	chr9	35604982	35623413
CD72_chr9_35604982_35623413	0/0	g0020	2	1	1	0	0	0	CD72	chr9	35604982	35623413
CD72_chr9_35604982_35623413	0/0	g0021	2	1	0	0	0	1	CD72	chr9	35604982	35623413
CD72_chr9_35604982_35623413	0/0	g0022	2	0	0	2	0	0	CD72	chr9	35604982	35623413