JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
CD72_chr9_35604982_35623413	0/0	g0023	2	2	0	0	0	0	CD72	chr9	35604982	35623413
CD72_chr9_35604982_35623413	0/0	g0024	2	2	0	0	0	0	CD72	chr9	35604982	35623413
CD72_chr9_35604982_35623413	0/0	g0025	2	0	0	2	0	0	CD72	chr9	35604982	35623413
CD72_chr9_35604982_35623413	0/0	g0026	1	0	0	1	0	0	CD72	chr9	35604982	35623413
CD72_chr9_35604982_35623413	0/0	g0027	1	0	0	1	0	0	CD72	chr9	35604982	35623413
CD72_chr9_35604982_35623413	0/0	g0028	1	1	0	0	0	0	CD72	chr9	35604982	35623413
CD72_chr9_35604982_35623413	0/0	g0029	1	1	0	0	0	0	CD72	chr9	35604982	35623413
CD72_chr9_35604982_35623413	0/0	g0030	1	0	0	1	0	0	CD72	chr9	35604982	35623413
CD72_chr9_35604982_35623413	0/0	g0031	1	0	0	0	0	1	CD72	chr9	35604982	35623413
CD72_chr9_35604982_35623413	0/0	g0032	1	0	0	1	0	0	CD72	chr9	35604982	35623413
CD72_chr9_35604982_35623413	0/0	g0033	1	1	0	0	0	0	CD72	chr9	35604982	35623413
CD72_chr9_35604982_35623413	0/0	g0034	1	0	0	1	0	0	CD72	chr9	35604982	35623413
CD72_chr9_35604982_35623413	0/0	g0035	1	0	0	1	0	0	CD72	chr9	35604982	35623413
CD72_chr9_35604982_35623413	0/0	g0036	1	0	0	1	0	0	CD72	chr9	35604982	35623413
CD72_chr9_35604982_35623413	0/0	g0037	1	0	0	0	0	1	CD72	chr9	35604982	35623413
CD72_chr9_35604982_35623413	0/0	g0038	1	1	0	0	0	0	CD72	chr9	35604982	35623413
CD72_chr9_35604982_35623413	0/0	g0039	1	0	0	1	0	0	CD72	chr9	35604982	35623413
CD72_chr9_35604982_35623413	0/0	g0040	1	0	0	1	0	0	CD72	chr9	35604982	35623413
CD72_chr9_35604982_35623413	0/0	g0041	1	0	0	1	0	0	CD72	chr9	35604982	35623413
CD72_chr9_35604982_35623413	0/0	g0042	1	0	0	1	0	0	CD72	chr9	35604982	35623413
CD72_chr9_35604982_35623413	0/0	g0043	1	0	1	0	0	0	CD72	chr9	35604982	35623413
CD72_chr9_35604982_35623413	0/0	g0044	1	0	0	1	0	0	CD72	chr9	35604982	35623413
CD72_chr9_35604982_35623413	0/0	g0045	1	0	0	1	0	0	CD72	chr9	35604982	35623413
CD72_chr9_35604982_35623413	0/0	g0046	1	0	0	1	0	0	CD72	chr9	35604982	35623413
CD72_chr9_35604982_35623413	0/0	g0047	1	1	0	0	0	0	CD72	chr9	35604982	35623413
CD72_chr9_35604982_35623413	0/0	g0048	1	1	0	0	0	0	CD72	chr9	35604982	35623413
CD72_chr9_35604982_35623413	0/0	g0049	1	0	0	1	0	0	CD72	chr9	35604982	35623413
CD72_chr9_35604982_35623413	0/0	g0050	1	1	0	0	0	0	CD72	chr9	35604982	35623413
CD72_chr9_35604982_35623413	0/0	g0051	1	1	0	0	0	0	CD72	chr9	35604982	35623413
CD72_chr9_35604982_35623413	0/0	g0052	1	1	0	0	0	0	CD72	chr9	35604982	35623413
CD72_chr9_35604982_35623413	0/0	g0053	1	0	1	0	0	0	CD72	chr9	35604982	35623413
CD72_chr9_35604982_35623413	0/0	g0054	1	1	0	0	0	0	CD72	chr9	35604982	35623413
CD72_chr9_35604982_35623413	0/0	g0055	1	0	0	0	0	1	CD72	chr9	35604982	35623413
CD72_chr9_35604982_35623413	0/0	g0056	1	1	0	0	0	0	CD72	chr9	35604982	35623413
CD72_chr9_35604982_35623413	0/0	g0057	1	1	0	0	0	0	CD72	chr9	35604982	35623413
CD72_chr9_35604982_35623413	0/0	g0058	1	0	1	0	0	0	CD72	chr9	35604982	35623413
CD72_chr9_35604982_35623413	0/0	g0059	1	0	1	0	0	0	CD72	chr9	35604982	35623413
CD72_chr9_35604982_35623413	0/0	g0060	1	0	0	0	0	1	CD72	chr9	35604982	35623413
CD72_chr9_35604982_35623413	0/0	g0061	1	0	0	1	0	0	CD72	chr9	35604982	35623413
CD72_chr9_35604982_35623413	0/0	g0062	1	0	0	1	0	0	CD72	chr9	35604982	35623413
CD72_chr9_35604982_35623413	0/0	g0063	1	1	0	0	0	0	CD72	chr9	35604982	35623413
CD72_chr9_35604982_35623413	0/0	g0064	1	1	0	0	0	0	CD72	chr9	35604982	35623413
CD72_chr9_35604982_35623413	0/0	g0065	1	1	0	0	0	0	CD72	chr9	35604982	35623413
CD72_chr9_35604982_35623413	0/0	g0066	1	0	1	0	0	0	CD72	chr9	35604982	35623413
CD74_chr5_150396639_150417910	1/1	g0001	80	13	16	43	2	4	CD74	chr5	150396639	150417910
CD74_chr5_150396639_150417910	0/0	g0002	44	4	13	16	2	9	CD74	chr5	150396639	150417910
CD74_chr5_150396639_150417910	0/0	g0003	31	0	0	31	0	0	CD74	chr5	150396639	150417910
CD74_chr5_150396639_150417910	0/0	g0004	15	2	4	6	1	2	CD74	chr5	150396639	150417910
CD74_chr5_150396639_150417910	0/0	g0005	8	0	3	5	0	0	CD74	chr5	150396639	150417910
CD74_chr5_150396639_150417910	0/0	g0006	5	0	1	3	0	1	CD74	chr5	150396639	150417910