JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ACVR2A_chr2_147840029_147935822	0/0	g0283	1	0	0	1	0	0	ACVR2A	chr2	147840029	147935822
ACVR2A_chr2_147840029_147935822	0/0	g0284	1	1	0	0	0	0	ACVR2A	chr2	147840029	147935822
ACVR2A_chr2_147840029_147935822	0/0	g0285	1	0	1	0	0	0	ACVR2A	chr2	147840029	147935822
ACVR2A_chr2_147840029_147935822	0/0	g0286	1	1	0	0	0	0	ACVR2A	chr2	147840029	147935822
ACVR2A_chr2_147840029_147935822	0/0	g0287	1	1	0	0	0	0	ACVR2A	chr2	147840029	147935822
ACVR2A_chr2_147840029_147935822	0/0	g0288	1	1	0	0	0	0	ACVR2A	chr2	147840029	147935822
ACVR2A_chr2_147840029_147935822	0/0	g0289	1	1	0	0	0	0	ACVR2A	chr2	147840029	147935822
ACVR2A_chr2_147840029_147935822	0/0	g0290	1	0	0	1	0	0	ACVR2A	chr2	147840029	147935822
ACVR2A_chr2_147840029_147935822	0/0	g0291	1	0	0	1	0	0	ACVR2A	chr2	147840029	147935822
ACVR2A_chr2_147840029_147935822	0/0	g0292	1	1	0	0	0	0	ACVR2A	chr2	147840029	147935822
ACVR2A_chr2_147840029_147935822	0/0	g0293	1	1	0	0	0	0	ACVR2A	chr2	147840029	147935822
ACVR2A_chr2_147840029_147935822	0/0	g0294	1	1	0	0	0	0	ACVR2A	chr2	147840029	147935822
ACVR2A_chr2_147840029_147935822	0/0	g0295	1	0	0	1	0	0	ACVR2A	chr2	147840029	147935822
ACVR2A_chr2_147840029_147935822	0/0	g0296	1	0	1	0	0	0	ACVR2A	chr2	147840029	147935822
ACVR2A_chr2_147840029_147935822	0/0	g0297	1	1	0	0	0	0	ACVR2A	chr2	147840029	147935822
ACVR2A_chr2_147840029_147935822	0/0	g0298	1	0	0	0	0	1	ACVR2A	chr2	147840029	147935822
ACVR2A_chr2_147840029_147935822	0/0	g0299	1	0	1	0	0	0	ACVR2A	chr2	147840029	147935822
ACVR2A_chr2_147840029_147935822	0/0	g0300	1	0	0	1	0	0	ACVR2A	chr2	147840029	147935822
ACVR2A_chr2_147840029_147935822	0/0	g0301	1	0	0	1	0	0	ACVR2A	chr2	147840029	147935822
ACVR2A_chr2_147840029_147935822	0/0	g0302	1	0	0	1	0	0	ACVR2A	chr2	147840029	147935822
ACVR2A_chr2_147840029_147935822	0/0	g0303	1	0	0	1	0	0	ACVR2A	chr2	147840029	147935822
ACVR2A_chr2_147840029_147935822	0/0	g0304	1	0	0	0	0	1	ACVR2A	chr2	147840029	147935822
ACVR2A_chr2_147840029_147935822	0/0	g0305	1	0	0	0	0	1	ACVR2A	chr2	147840029	147935822
ACVR2A_chr2_147840029_147935822	0/0	g0306	1	0	0	1	0	0	ACVR2A	chr2	147840029	147935822
ACVR2A_chr2_147840029_147935822	0/0	g0307	1	0	0	0	0	1	ACVR2A	chr2	147840029	147935822
ACVR2A_chr2_147840029_147935822	0/0	g0308	1	0	0	1	0	0	ACVR2A	chr2	147840029	147935822
ACVR2A_chr2_147840029_147935822	0/0	g0309	1	0	1	0	0	0	ACVR2A	chr2	147840029	147935822
ACVR2A_chr2_147840029_147935822	0/0	g0310	1	0	1	0	0	0	ACVR2A	chr2	147840029	147935822
ACVR2A_chr2_147840029_147935822	0/0	g0311	1	0	1	0	0	0	ACVR2A	chr2	147840029	147935822
ACVR2A_chr2_147840029_147935822	0/0	g0312	1	0	1	0	0	0	ACVR2A	chr2	147840029	147935822
ACVR2A_chr2_147840029_147935822	0/0	g0313	1	0	0	1	0	0	ACVR2A	chr2	147840029	147935822
ACVR2A_chr2_147840029_147935822	0/0	g0314	1	0	0	1	0	0	ACVR2A	chr2	147840029	147935822
ACVR2A_chr2_147840029_147935822	0/0	g0315	1	0	0	1	0	0	ACVR2A	chr2	147840029	147935822
ACVR2A_chr2_147840029_147935822	0/0	g0316	1	0	0	1	0	0	ACVR2A	chr2	147840029	147935822
ACVR2A_chr2_147840029_147935822	0/0	g0317	1	0	0	1	0	0	ACVR2A	chr2	147840029	147935822
ACVR2B_chr3_38448890_38498142	0/0	g0001	59	1	6	42	0	10	ACVR2B	chr3	38448890	38498142
ACVR2B_chr3_38448890_38498142	0/0	g0002	21	0	5	16	0	0	ACVR2B	chr3	38448890	38498142
ACVR2B_chr3_38448890_38498142	0/0	g0003	21	0	4	15	0	2	ACVR2B	chr3	38448890	38498142
ACVR2B_chr3_38448890_38498142	0/0	g0004	17	4	6	4	2	1	ACVR2B	chr3	38448890	38498142
ACVR2B_chr3_38448890_38498142	1/0	g0005	15	0	2	10	0	2	ACVR2B	chr3	38448890	38498142
ACVR2B_chr3_38448890_38498142	0/0	g0006	15	1	1	12	0	1	ACVR2B	chr3	38448890	38498142
ACVR2B_chr3_38448890_38498142	0/0	g0007	10	5	4	0	0	1	ACVR2B	chr3	38448890	38498142
ACVR2B_chr3_38448890_38498142	0/0	g0008	7	0	0	7	0	0	ACVR2B	chr3	38448890	38498142
ACVR2B_chr3_38448890_38498142	0/0	g0009	7	7	0	0	0	0	ACVR2B	chr3	38448890	38498142
ACVR2B_chr3_38448890_38498142	0/0	g0010	6	0	0	5	0	1	ACVR2B	chr3	38448890	38498142
ACVR2B_chr3_38448890_38498142	0/0	g0011	5	4	1	0	0	0	ACVR2B	chr3	38448890	38498142
ACVR2B_chr3_38448890_38498142	0/0	g0012	4	0	0	4	0	0	ACVR2B	chr3	38448890	38498142
ACVR2B_chr3_38448890_38498142	0/0	g0013	4	0	4	0	0	0	ACVR2B	chr3	38448890	38498142
ACVR2B_chr3_38448890_38498142	0/0	g0014	4	4	0	0	0	0	ACVR2B	chr3	38448890	38498142
ACVR2B_chr3_38448890_38498142	0/0	g0015	4	0	0	4	0	0	ACVR2B	chr3	38448890	38498142