JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
CDC25A_chr3_48152146_48193417	0/0	g0251	1	0	1	0	0	0	CDC25A	chr3	48152146	48193417
CDC25A_chr3_48152146_48193417	0/0	g0252	1	0	0	1	0	0	CDC25A	chr3	48152146	48193417
CDC25A_chr3_48152146_48193417	0/0	g0253	1	0	0	1	0	0	CDC25A	chr3	48152146	48193417
CDC25A_chr3_48152146_48193417	0/0	g0254	1	0	0	1	0	0	CDC25A	chr3	48152146	48193417
CDC25A_chr3_48152146_48193417	0/0	g0255	1	0	0	1	0	0	CDC25A	chr3	48152146	48193417
CDC25A_chr3_48152146_48193417	0/0	g0256	1	0	0	1	0	0	CDC25A	chr3	48152146	48193417
CDC25A_chr3_48152146_48193417	0/0	g0257	1	0	0	1	0	0	CDC25A	chr3	48152146	48193417
CDC25A_chr3_48152146_48193417	0/0	g0258	1	0	0	1	0	0	CDC25A	chr3	48152146	48193417
CDC25A_chr3_48152146_48193417	0/0	g0259	1	1	0	0	0	0	CDC25A	chr3	48152146	48193417
CDC25A_chr3_48152146_48193417	0/0	g0260	1	1	0	0	0	0	CDC25A	chr3	48152146	48193417
CDC25A_chr3_48152146_48193417	0/0	g0261	1	0	0	1	0	0	CDC25A	chr3	48152146	48193417
CDC25A_chr3_48152146_48193417	0/0	g0262	1	0	0	1	0	0	CDC25A	chr3	48152146	48193417
CDC25A_chr3_48152146_48193417	0/0	g0263	1	0	0	1	0	0	CDC25A	chr3	48152146	48193417
CDC25A_chr3_48152146_48193417	0/0	g0264	1	1	0	0	0	0	CDC25A	chr3	48152146	48193417
CDC25A_chr3_48152146_48193417	0/0	g0265	1	0	0	1	0	0	CDC25A	chr3	48152146	48193417
CDC25A_chr3_48152146_48193417	0/0	g0266	1	0	0	1	0	0	CDC25A	chr3	48152146	48193417
CDC25A_chr3_48152146_48193417	0/0	g0267	1	1	0	0	0	0	CDC25A	chr3	48152146	48193417
CDC25A_chr3_48152146_48193417	0/0	g0268	1	0	0	0	0	1	CDC25A	chr3	48152146	48193417
CDC25A_chr3_48152146_48193417	0/0	g0269	1	1	0	0	0	0	CDC25A	chr3	48152146	48193417
CDC25A_chr3_48152146_48193417	0/0	g0270	1	1	0	0	0	0	CDC25A	chr3	48152146	48193417
CDC25A_chr3_48152146_48193417	0/0	g0271	1	1	0	0	0	0	CDC25A	chr3	48152146	48193417
CDC25A_chr3_48152146_48193417	0/0	g0272	1	1	0	0	0	0	CDC25A	chr3	48152146	48193417
CDC25A_chr3_48152146_48193417	0/0	g0273	1	0	1	0	0	0	CDC25A	chr3	48152146	48193417
CDC25A_chr3_48152146_48193417	0/0	g0274	1	0	1	0	0	0	CDC25A	chr3	48152146	48193417
CDC25A_chr3_48152146_48193417	0/0	g0275	1	1	0	0	0	0	CDC25A	chr3	48152146	48193417
CDC25A_chr3_48152146_48193417	0/0	g0276	1	0	0	0	1	0	CDC25A	chr3	48152146	48193417
CDC25A_chr3_48152146_48193417	0/0	g0277	1	0	1	0	0	0	CDC25A	chr3	48152146	48193417
CDC25A_chr3_48152146_48193417	0/0	g0278	1	0	1	0	0	0	CDC25A	chr3	48152146	48193417
CDC25B_chr20_3791310_3811115	0/1	g0001	55	0	6	40	2	6	CDC25B	chr20	3791310	3811115
CDC25B_chr20_3791310_3811115	0/0	g0002	28	2	7	15	0	4	CDC25B	chr20	3791310	3811115
CDC25B_chr20_3791310_3811115	0/0	g0003	27	1	4	15	3	4	CDC25B	chr20	3791310	3811115
CDC25B_chr20_3791310_3811115	0/0	g0004	26	0	5	19	0	2	CDC25B	chr20	3791310	3811115
CDC25B_chr20_3791310_3811115	0/0	g0005	24	10	2	10	1	1	CDC25B	chr20	3791310	3811115
CDC25B_chr20_3791310_3811115	0/0	g0006	12	0	1	10	0	1	CDC25B	chr20	3791310	3811115
CDC25B_chr20_3791310_3811115	0/0	g0007	10	1	3	4	0	2	CDC25B	chr20	3791310	3811115
CDC25B_chr20_3791310_3811115	0/0	g0008	8	8	0	0	0	0	CDC25B	chr20	3791310	3811115
CDC25B_chr20_3791310_3811115	0/0	g0009	7	3	4	0	0	0	CDC25B	chr20	3791310	3811115
CDC25B_chr20_3791310_3811115	0/0	g0010	6	0	5	1	0	0	CDC25B	chr20	3791310	3811115
CDC25B_chr20_3791310_3811115	0/0	g0011	6	0	2	1	2	1	CDC25B	chr20	3791310	3811115
CDC25B_chr20_3791310_3811115	0/0	g0012	5	5	0	0	0	0	CDC25B	chr20	3791310	3811115
CDC25B_chr20_3791310_3811115	0/0	g0013	5	4	1	0	0	0	CDC25B	chr20	3791310	3811115
CDC25B_chr20_3791310_3811115	0/0	g0014	5	0	1	4	0	0	CDC25B	chr20	3791310	3811115
CDC25B_chr20_3791310_3811115	0/0	g0015	5	0	2	3	0	0	CDC25B	chr20	3791310	3811115
CDC25B_chr20_3791310_3811115	0/0	g0016	5	0	0	5	0	0	CDC25B	chr20	3791310	3811115
CDC25B_chr20_3791310_3811115	0/0	g0017	5	0	2	1	2	0	CDC25B	chr20	3791310	3811115
CDC25B_chr20_3791310_3811115	0/0	g0018	5	0	2	0	1	2	CDC25B	chr20	3791310	3811115
CDC25B_chr20_3791310_3811115	0/0	g0019	4	0	0	4	0	0	CDC25B	chr20	3791310	3811115
CDC25B_chr20_3791310_3811115	0/0	g0020	4	0	0	2	0	2	CDC25B	chr20	3791310	3811115
CDC25B_chr20_3791310_3811115	0/0	g0021	4	0	0	3	0	1	CDC25B	chr20	3791310	3811115
CDC25B_chr20_3791310_3811115	0/0	g0022	4	0	0	2	0	2	CDC25B	chr20	3791310	3811115