JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ACVR2B_chr3_38448890_38498142	0/0	g0166	1	0	1	0	0	0	ACVR2B	chr3	38448890	38498142
ACVR2B_chr3_38448890_38498142	0/0	g0167	1	0	0	0	0	1	ACVR2B	chr3	38448890	38498142
ACVR2B_chr3_38448890_38498142	0/0	g0168	1	0	1	0	0	0	ACVR2B	chr3	38448890	38498142
ACVR2B_chr3_38448890_38498142	0/0	g0169	1	0	0	0	0	1	ACVR2B	chr3	38448890	38498142
ACVR2B_chr3_38448890_38498142	0/0	g0170	1	0	0	1	0	0	ACVR2B	chr3	38448890	38498142
ACVR2B_chr3_38448890_38498142	0/0	g0171	1	0	0	1	0	0	ACVR2B	chr3	38448890	38498142
ACVR2B_chr3_38448890_38498142	0/0	g0172	1	0	0	0	0	1	ACVR2B	chr3	38448890	38498142
ACVR2B_chr3_38448890_38498142	0/0	g0173	1	0	1	0	0	0	ACVR2B	chr3	38448890	38498142
ACVR2B_chr3_38448890_38498142	0/0	g0174	1	0	0	1	0	0	ACVR2B	chr3	38448890	38498142
ACVR2B_chr3_38448890_38498142	0/0	g0175	1	0	0	1	0	0	ACVR2B	chr3	38448890	38498142
ACVR2B_chr3_38448890_38498142	0/0	g0176	1	0	0	0	0	1	ACVR2B	chr3	38448890	38498142
ACVR2B_chr3_38448890_38498142	0/0	g0177	1	0	0	1	0	0	ACVR2B	chr3	38448890	38498142
ACVR2B_chr3_38448890_38498142	0/0	g0178	1	0	0	0	0	1	ACVR2B	chr3	38448890	38498142
ACVR2B_chr3_38448890_38498142	0/0	g0179	1	0	0	1	0	0	ACVR2B	chr3	38448890	38498142
ACVR2B_chr3_38448890_38498142	0/0	g0180	1	0	0	0	1	0	ACVR2B	chr3	38448890	38498142
ACVR2B_chr3_38448890_38498142	0/0	g0181	1	0	0	1	0	0	ACVR2B	chr3	38448890	38498142
ACVR2B_chr3_38448890_38498142	0/0	g0182	1	0	0	0	1	0	ACVR2B	chr3	38448890	38498142
ACVR2B_chr3_38448890_38498142	0/0	g0183	1	0	0	1	0	0	ACVR2B	chr3	38448890	38498142
ACVR2B_chr3_38448890_38498142	0/0	g0184	1	0	0	1	0	0	ACVR2B	chr3	38448890	38498142
ACVR2B_chr3_38448890_38498142	0/0	g0185	1	0	0	0	0	1	ACVR2B	chr3	38448890	38498142
ACVR2B_chr3_38448890_38498142	0/0	g0186	1	0	1	0	0	0	ACVR2B	chr3	38448890	38498142
ACVR2B_chr3_38448890_38498142	0/0	g0187	1	0	0	1	0	0	ACVR2B	chr3	38448890	38498142
ACVRL1_chr12_51902504_51928361	1/0	g0001	34	0	12	15	2	4	ACVRL1	chr12	51902504	51928361
ACVRL1_chr12_51902504_51928361	0/0	g0002	34	0	1	29	2	2	ACVRL1	chr12	51902504	51928361
ACVRL1_chr12_51902504_51928361	0/0	g0003	26	2	3	21	0	0	ACVRL1	chr12	51902504	51928361
ACVRL1_chr12_51902504_51928361	0/0	g0004	21	4	3	9	1	4	ACVRL1	chr12	51902504	51928361
ACVRL1_chr12_51902504_51928361	0/0	g0005	20	0	0	20	0	0	ACVRL1	chr12	51902504	51928361
ACVRL1_chr12_51902504_51928361	0/0	g0006	14	0	1	12	0	1	ACVRL1	chr12	51902504	51928361
ACVRL1_chr12_51902504_51928361	0/0	g0007	11	0	0	11	0	0	ACVRL1	chr12	51902504	51928361
ACVRL1_chr12_51902504_51928361	0/0	g0008	11	3	0	8	0	0	ACVRL1	chr12	51902504	51928361
ACVRL1_chr12_51902504_51928361	0/0	g0009	9	0	0	9	0	0	ACVRL1	chr12	51902504	51928361
ACVRL1_chr12_51902504_51928361	0/0	g0010	9	0	0	8	0	1	ACVRL1	chr12	51902504	51928361
ACVRL1_chr12_51902504_51928361	0/0	g0011	8	0	0	8	0	0	ACVRL1	chr12	51902504	51928361
ACVRL1_chr12_51902504_51928361	0/0	g0012	7	5	0	2	0	0	ACVRL1	chr12	51902504	51928361
ACVRL1_chr12_51902504_51928361	0/0	g0013	6	1	1	1	0	3	ACVRL1	chr12	51902504	51928361
ACVRL1_chr12_51902504_51928361	0/0	g0014	6	0	4	2	0	0	ACVRL1	chr12	51902504	51928361
ACVRL1_chr12_51902504_51928361	0/0	g0015	6	0	4	0	1	1	ACVRL1	chr12	51902504	51928361
ACVRL1_chr12_51902504_51928361	0/0	g0016	5	1	3	1	0	0	ACVRL1	chr12	51902504	51928361
ACVRL1_chr12_51902504_51928361	0/0	g0017	5	1	2	1	0	1	ACVRL1	chr12	51902504	51928361
ACVRL1_chr12_51902504_51928361	0/0	g0018	5	3	2	0	0	0	ACVRL1	chr12	51902504	51928361
ACVRL1_chr12_51902504_51928361	0/0	g0019	4	0	0	2	0	2	ACVRL1	chr12	51902504	51928361
ACVRL1_chr12_51902504_51928361	0/0	g0020	4	0	3	0	1	0	ACVRL1	chr12	51902504	51928361
ACVRL1_chr12_51902504_51928361	0/0	g0021	4	0	0	0	0	4	ACVRL1	chr12	51902504	51928361
ACVRL1_chr12_51902504_51928361	0/0	g0022	4	0	2	0	1	1	ACVRL1	chr12	51902504	51928361
ACVRL1_chr12_51902504_51928361	0/0	g0023	4	2	2	0	0	0	ACVRL1	chr12	51902504	51928361
ACVRL1_chr12_51902504_51928361	0/0	g0024	4	4	0	0	0	0	ACVRL1	chr12	51902504	51928361
ACVRL1_chr12_51902504_51928361	0/0	g0025	4	1	0	2	0	1	ACVRL1	chr12	51902504	51928361
ACVRL1_chr12_51902504_51928361	0/0	g0026	3	0	2	0	0	1	ACVRL1	chr12	51902504	51928361
ACVRL1_chr12_51902504_51928361	0/0	g0027	3	0	3	0	0	0	ACVRL1	chr12	51902504	51928361
ACVRL1_chr12_51902504_51928361	0/0	g0028	3	0	2	0	1	0	ACVRL1	chr12	51902504	51928361