JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
CDC37_chr19_10386133_10408542	0/0	g0196	1	0	0	1	0	0	CDC37	chr19	10386133	10408542
CDC37_chr19_10386133_10408542	0/0	g0197	1	1	0	0	0	0	CDC37	chr19	10386133	10408542
CDC37_chr19_10386133_10408542	0/0	g0198	1	0	0	1	0	0	CDC37	chr19	10386133	10408542
CDC37_chr19_10386133_10408542	0/0	g0199	1	1	0	0	0	0	CDC37	chr19	10386133	10408542
CDC37_chr19_10386133_10408542	0/0	g0200	1	0	0	1	0	0	CDC37	chr19	10386133	10408542
CDC37_chr19_10386133_10408542	0/0	g0201	1	0	0	1	0	0	CDC37	chr19	10386133	10408542
CDC37_chr19_10386133_10408542	0/0	g0202	1	1	0	0	0	0	CDC37	chr19	10386133	10408542
CDC37_chr19_10386133_10408542	0/0	g0203	1	0	0	1	0	0	CDC37	chr19	10386133	10408542
CDC37_chr19_10386133_10408542	0/0	g0204	1	0	0	1	0	0	CDC37	chr19	10386133	10408542
CDC37_chr19_10386133_10408542	0/0	g0205	1	0	0	1	0	0	CDC37	chr19	10386133	10408542
CDC37_chr19_10386133_10408542	0/0	g0206	1	0	0	1	0	0	CDC37	chr19	10386133	10408542
CDC37_chr19_10386133_10408542	0/0	g0207	1	0	0	1	0	0	CDC37	chr19	10386133	10408542
CDC37_chr19_10386133_10408542	0/0	g0208	1	0	1	0	0	0	CDC37	chr19	10386133	10408542
CDC37_chr19_10386133_10408542	0/0	g0209	1	0	0	1	0	0	CDC37	chr19	10386133	10408542
CDC37_chr19_10386133_10408542	0/0	g0210	1	1	0	0	0	0	CDC37	chr19	10386133	10408542
CDC37_chr19_10386133_10408542	0/0	g0211	1	0	0	1	0	0	CDC37	chr19	10386133	10408542
CDC37_chr19_10386133_10408542	0/0	g0212	1	1	0	0	0	0	CDC37	chr19	10386133	10408542
CDC37_chr19_10386133_10408542	0/0	g0213	1	1	0	0	0	0	CDC37	chr19	10386133	10408542
CDC37_chr19_10386133_10408542	0/0	g0214	1	0	0	1	0	0	CDC37	chr19	10386133	10408542
CDC40_chr6_110175427_110237232	0/0	g0001	7	0	0	7	0	0	CDC40	chr6	110175427	110237232
CDC40_chr6_110175427_110237232	0/0	g0002	7	0	1	5	0	1	CDC40	chr6	110175427	110237232
CDC40_chr6_110175427_110237232	0/0	g0003	4	0	1	3	0	0	CDC40	chr6	110175427	110237232
CDC40_chr6_110175427_110237232	0/0	g0004	4	4	0	0	0	0	CDC40	chr6	110175427	110237232
CDC40_chr6_110175427_110237232	0/0	g0005	4	0	3	0	1	0	CDC40	chr6	110175427	110237232
CDC40_chr6_110175427_110237232	0/0	g0006	3	3	0	0	0	0	CDC40	chr6	110175427	110237232
CDC40_chr6_110175427_110237232	0/0	g0007	3	0	0	3	0	0	CDC40	chr6	110175427	110237232
CDC40_chr6_110175427_110237232	0/0	g0008	3	0	2	0	1	0	CDC40	chr6	110175427	110237232
CDC40_chr6_110175427_110237232	0/0	g0009	3	0	0	3	0	0	CDC40	chr6	110175427	110237232
CDC40_chr6_110175427_110237232	0/0	g0010	3	0	0	3	0	0	CDC40	chr6	110175427	110237232
CDC40_chr6_110175427_110237232	0/0	g0011	2	1	0	1	0	0	CDC40	chr6	110175427	110237232
CDC40_chr6_110175427_110237232	0/0	g0012	2	1	1	0	0	0	CDC40	chr6	110175427	110237232
CDC40_chr6_110175427_110237232	0/0	g0013	2	2	0	0	0	0	CDC40	chr6	110175427	110237232
CDC40_chr6_110175427_110237232	0/0	g0014	2	0	0	2	0	0	CDC40	chr6	110175427	110237232
CDC40_chr6_110175427_110237232	0/0	g0015	2	2	0	0	0	0	CDC40	chr6	110175427	110237232
CDC40_chr6_110175427_110237232	0/0	g0016	2	2	0	0	0	0	CDC40	chr6	110175427	110237232
CDC40_chr6_110175427_110237232	0/0	g0017	2	0	0	2	0	0	CDC40	chr6	110175427	110237232
CDC40_chr6_110175427_110237232	0/0	g0018	2	0	0	2	0	0	CDC40	chr6	110175427	110237232
CDC40_chr6_110175427_110237232	0/0	g0019	2	0	0	2	0	0	CDC40	chr6	110175427	110237232
CDC40_chr6_110175427_110237232	0/0	g0020	2	0	0	2	0	0	CDC40	chr6	110175427	110237232
CDC40_chr6_110175427_110237232	0/0	g0021	2	0	2	0	0	0	CDC40	chr6	110175427	110237232
CDC40_chr6_110175427_110237232	0/0	g0022	2	0	1	1	0	0	CDC40	chr6	110175427	110237232
CDC40_chr6_110175427_110237232	0/0	g0023	2	0	0	2	0	0	CDC40	chr6	110175427	110237232
CDC40_chr6_110175427_110237232	0/0	g0024	2	0	1	0	0	1	CDC40	chr6	110175427	110237232
CDC40_chr6_110175427_110237232	0/0	g0025	2	0	1	0	1	0	CDC40	chr6	110175427	110237232
CDC40_chr6_110175427_110237232	0/0	g0026	1	0	0	1	0	0	CDC40	chr6	110175427	110237232
CDC40_chr6_110175427_110237232	0/0	g0027	1	0	0	1	0	0	CDC40	chr6	110175427	110237232
CDC40_chr6_110175427_110237232	0/0	g0028	1	0	0	0	1	0	CDC40	chr6	110175427	110237232
CDC40_chr6_110175427_110237232	0/0	g0029	1	0	0	0	1	0	CDC40	chr6	110175427	110237232
CDC40_chr6_110175427_110237232	0/0	g0030	1	0	0	1	0	0	CDC40	chr6	110175427	110237232
CDC40_chr6_110175427_110237232	0/0	g0031	1	0	0	0	0	1	CDC40	chr6	110175427	110237232