JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ACVRL1_chr12_51902504_51928361	0/0	g0129	1	0	0	1	0	0	ACVRL1	chr12	51902504	51928361
ACVRL1_chr12_51902504_51928361	0/0	g0130	1	0	0	1	0	0	ACVRL1	chr12	51902504	51928361
ACVRL1_chr12_51902504_51928361	0/0	g0131	1	0	0	1	0	0	ACVRL1	chr12	51902504	51928361
ACVRL1_chr12_51902504_51928361	0/0	g0132	1	0	0	0	0	1	ACVRL1	chr12	51902504	51928361
ACVRL1_chr12_51902504_51928361	0/0	g0133	1	0	0	1	0	0	ACVRL1	chr12	51902504	51928361
ACVRL1_chr12_51902504_51928361	0/0	g0134	1	0	0	1	0	0	ACVRL1	chr12	51902504	51928361
ACVRL1_chr12_51902504_51928361	0/0	g0135	1	0	0	0	0	1	ACVRL1	chr12	51902504	51928361
ACVRL1_chr12_51902504_51928361	0/0	g0136	1	0	0	0	1	0	ACVRL1	chr12	51902504	51928361
ACVRL1_chr12_51902504_51928361	0/0	g0137	1	0	0	1	0	0	ACVRL1	chr12	51902504	51928361
ACVRL1_chr12_51902504_51928361	0/0	g0138	1	0	0	0	0	1	ACVRL1	chr12	51902504	51928361
ACVRL1_chr12_51902504_51928361	0/0	g0139	1	0	0	1	0	0	ACVRL1	chr12	51902504	51928361
ACVRL1_chr12_51902504_51928361	0/0	g0140	1	0	0	1	0	0	ACVRL1	chr12	51902504	51928361
ACVRL1_chr12_51902504_51928361	0/0	g0141	1	0	0	1	0	0	ACVRL1	chr12	51902504	51928361
ACVRL1_chr12_51902504_51928361	0/0	g0142	1	0	0	1	0	0	ACVRL1	chr12	51902504	51928361
ACVRL1_chr12_51902504_51928361	0/0	g0143	1	0	0	0	0	1	ACVRL1	chr12	51902504	51928361
ACVRL1_chr12_51902504_51928361	0/0	g0144	1	0	1	0	0	0	ACVRL1	chr12	51902504	51928361
ACVRL1_chr12_51902504_51928361	0/0	g0145	1	0	0	0	0	1	ACVRL1	chr12	51902504	51928361
ACVRL1_chr12_51902504_51928361	0/0	g0146	1	0	0	0	0	1	ACVRL1	chr12	51902504	51928361
ACVRL1_chr12_51902504_51928361	0/0	g0147	1	0	0	0	0	1	ACVRL1	chr12	51902504	51928361
ACVRL1_chr12_51902504_51928361	0/0	g0148	1	0	0	1	0	0	ACVRL1	chr12	51902504	51928361
ACVRL1_chr12_51902504_51928361	0/0	g0149	1	1	0	0	0	0	ACVRL1	chr12	51902504	51928361
ACVRL1_chr12_51902504_51928361	0/0	g0150	1	1	0	0	0	0	ACVRL1	chr12	51902504	51928361
ACVRL1_chr12_51902504_51928361	0/0	g0151	1	0	0	0	0	1	ACVRL1	chr12	51902504	51928361
ACVRL1_chr12_51902504_51928361	0/0	g0152	1	1	0	0	0	0	ACVRL1	chr12	51902504	51928361
ACVRL1_chr12_51902504_51928361	0/0	g0153	1	0	1	0	0	0	ACVRL1	chr12	51902504	51928361
ACVRL1_chr12_51902504_51928361	0/0	g0154	1	1	0	0	0	0	ACVRL1	chr12	51902504	51928361
ACVRL1_chr12_51902504_51928361	0/0	g0155	1	0	1	0	0	0	ACVRL1	chr12	51902504	51928361
ACVRL1_chr12_51902504_51928361	0/0	g0156	1	0	0	1	0	0	ACVRL1	chr12	51902504	51928361
ACVRL1_chr12_51902504_51928361	0/0	g0157	1	0	1	0	0	0	ACVRL1	chr12	51902504	51928361
ACVRL1_chr12_51902504_51928361	0/0	g0158	1	1	0	0	0	0	ACVRL1	chr12	51902504	51928361
ACVRL1_chr12_51902504_51928361	0/0	g0159	1	0	0	0	0	1	ACVRL1	chr12	51902504	51928361
ACVRL1_chr12_51902504_51928361	0/0	g0160	1	0	0	0	0	1	ACVRL1	chr12	51902504	51928361
ACY1_chr3_51978535_51994197	1/1	g0001	194	44	50	60	11	27	ACY1	chr3	51978535	51994197
ACY1_chr3_51978535_51994197	0/0	g0002	28	0	3	16	2	7	ACY1	chr3	51978535	51994197
ACY1_chr3_51978535_51994197	0/0	g0003	17	0	0	17	0	0	ACY1	chr3	51978535	51994197
ACY1_chr3_51978535_51994197	0/0	g0004	12	12	0	0	0	0	ACY1	chr3	51978535	51994197
ACY1_chr3_51978535_51994197	0/0	g0005	12	0	1	10	0	1	ACY1	chr3	51978535	51994197
ACY1_chr3_51978535_51994197	0/0	g0006	10	6	0	3	0	1	ACY1	chr3	51978535	51994197
ACY1_chr3_51978535_51994197	0/0	g0007	8	6	1	0	0	1	ACY1	chr3	51978535	51994197
ACY1_chr3_51978535_51994197	0/0	g0008	7	7	0	0	0	0	ACY1	chr3	51978535	51994197
ACY1_chr3_51978535_51994197	0/0	g0009	4	0	0	3	0	1	ACY1	chr3	51978535	51994197
ACY1_chr3_51978535_51994197	0/0	g0010	4	1	2	0	1	0	ACY1	chr3	51978535	51994197
ACY1_chr3_51978535_51994197	0/0	g0011	4	0	0	4	0	0	ACY1	chr3	51978535	51994197
ACY1_chr3_51978535_51994197	0/0	g0012	3	2	1	0	0	0	ACY1	chr3	51978535	51994197
ACY1_chr3_51978535_51994197	0/0	g0013	3	3	0	0	0	0	ACY1	chr3	51978535	51994197
ACY1_chr3_51978535_51994197	0/0	g0014	3	0	0	1	0	2	ACY1	chr3	51978535	51994197
ACY1_chr3_51978535_51994197	0/0	g0015	3	2	1	0	0	0	ACY1	chr3	51978535	51994197
ACY1_chr3_51978535_51994197	0/0	g0016	2	0	0	0	0	2	ACY1	chr3	51978535	51994197
ACY1_chr3_51978535_51994197	0/0	g0017	2	0	0	2	0	0	ACY1	chr3	51978535	51994197
ACY1_chr3_51978535_51994197	0/0	g0018	2	0	0	2	0	0	ACY1	chr3	51978535	51994197