JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ACY1_chr3_51978535_51994197	0/0	g0019	2	0	0	2	0	0	ACY1	chr3	51978535	51994197
ACY1_chr3_51978535_51994197	0/0	g0020	1	0	0	1	0	0	ACY1	chr3	51978535	51994197
ACY1_chr3_51978535_51994197	0/0	g0021	1	1	0	0	0	0	ACY1	chr3	51978535	51994197
ACY1_chr3_51978535_51994197	0/0	g0022	1	0	0	1	0	0	ACY1	chr3	51978535	51994197
ACY1_chr3_51978535_51994197	0/0	g0023	1	0	0	1	0	0	ACY1	chr3	51978535	51994197
ACY1_chr3_51978535_51994197	0/0	g0024	1	0	0	1	0	0	ACY1	chr3	51978535	51994197
ACY1_chr3_51978535_51994197	0/0	g0025	1	1	0	0	0	0	ACY1	chr3	51978535	51994197
ACY1_chr3_51978535_51994197	0/0	g0026	1	1	0	0	0	0	ACY1	chr3	51978535	51994197
ACY1_chr3_51978535_51994197	0/0	g0027	1	0	0	0	0	1	ACY1	chr3	51978535	51994197
ACY1_chr3_51978535_51994197	0/0	g0028	1	0	0	1	0	0	ACY1	chr3	51978535	51994197
ACY1_chr3_51978535_51994197	0/0	g0029	1	0	1	0	0	0	ACY1	chr3	51978535	51994197
ACY1_chr3_51978535_51994197	0/0	g0030	1	1	0	0	0	0	ACY1	chr3	51978535	51994197
ACY1_chr3_51978535_51994197	0/0	g0031	1	0	0	0	0	1	ACY1	chr3	51978535	51994197
ACY1_chr3_51978535_51994197	0/0	g0032	1	0	1	0	0	0	ACY1	chr3	51978535	51994197
ACY1_chr3_51978535_51994197	0/0	g0033	1	1	0	0	0	0	ACY1	chr3	51978535	51994197
ACY1_chr3_51978535_51994197	0/0	g0034	1	0	0	1	0	0	ACY1	chr3	51978535	51994197
ACY1_chr3_51978535_51994197	0/0	g0035	1	0	1	0	0	0	ACY1	chr3	51978535	51994197
ACY1_chr3_51978535_51994197	0/0	g0036	1	0	0	1	0	0	ACY1	chr3	51978535	51994197
ACY1_chr3_51978535_51994197	0/0	g0037	1	0	0	1	0	0	ACY1	chr3	51978535	51994197
ACY3_chr11_67637555_67655730	0/1	g0001	102	2	17	61	8	13	ACY3	chr11	67637555	67655730
ACY3_chr11_67637555_67655730	0/0	g0002	28	17	0	11	0	0	ACY3	chr11	67637555	67655730
ACY3_chr11_67637555_67655730	0/0	g0003	19	3	8	8	0	0	ACY3	chr11	67637555	67655730
ACY3_chr11_67637555_67655730	0/0	g0004	16	1	7	4	1	3	ACY3	chr11	67637555	67655730
ACY3_chr11_67637555_67655730	0/0	g0005	12	0	0	12	0	0	ACY3	chr11	67637555	67655730
ACY3_chr11_67637555_67655730	0/0	g0006	8	8	0	0	0	0	ACY3	chr11	67637555	67655730
ACY3_chr11_67637555_67655730	0/0	g0007	6	2	0	4	0	0	ACY3	chr11	67637555	67655730
ACY3_chr11_67637555_67655730	0/0	g0008	6	5	1	0	0	0	ACY3	chr11	67637555	67655730
ACY3_chr11_67637555_67655730	0/0	g0009	6	0	0	6	0	0	ACY3	chr11	67637555	67655730
ACY3_chr11_67637555_67655730	0/0	g0010	5	1	1	0	2	1	ACY3	chr11	67637555	67655730
ACY3_chr11_67637555_67655730	0/0	g0011	5	1	1	3	0	0	ACY3	chr11	67637555	67655730
ACY3_chr11_67637555_67655730	0/0	g0012	5	1	4	0	0	0	ACY3	chr11	67637555	67655730
ACY3_chr11_67637555_67655730	0/0	g0013	4	0	4	0	0	0	ACY3	chr11	67637555	67655730
ACY3_chr11_67637555_67655730	0/0	g0014	4	2	0	2	0	0	ACY3	chr11	67637555	67655730
ACY3_chr11_67637555_67655730	0/0	g0015	4	0	2	0	1	1	ACY3	chr11	67637555	67655730
ACY3_chr11_67637555_67655730	0/0	g0016	4	4	0	0	0	0	ACY3	chr11	67637555	67655730
ACY3_chr11_67637555_67655730	0/0	g0017	3	3	0	0	0	0	ACY3	chr11	67637555	67655730
ACY3_chr11_67637555_67655730	0/0	g0018	3	3	0	0	0	0	ACY3	chr11	67637555	67655730
ACY3_chr11_67637555_67655730	0/0	g0019	3	0	0	3	0	0	ACY3	chr11	67637555	67655730
ACY3_chr11_67637555_67655730	0/0	g0020	3	0	0	2	0	1	ACY3	chr11	67637555	67655730
ACY3_chr11_67637555_67655730	0/0	g0021	3	0	2	1	0	0	ACY3	chr11	67637555	67655730
ACY3_chr11_67637555_67655730	0/0	g0022	3	1	0	2	0	0	ACY3	chr11	67637555	67655730
ACY3_chr11_67637555_67655730	0/0	g0023	3	0	0	3	0	0	ACY3	chr11	67637555	67655730
ACY3_chr11_67637555_67655730	0/0	g0024	3	0	0	0	0	3	ACY3	chr11	67637555	67655730
ACY3_chr11_67637555_67655730	0/0	g0025	3	0	0	3	0	0	ACY3	chr11	67637555	67655730
ACY3_chr11_67637555_67655730	0/0	g0026	3	0	3	0	0	0	ACY3	chr11	67637555	67655730
ACY3_chr11_67637555_67655730	0/0	g0027	3	0	0	3	0	0	ACY3	chr11	67637555	67655730
ACY3_chr11_67637555_67655730	0/0	g0028	2	2	0	0	0	0	ACY3	chr11	67637555	67655730
ACY3_chr11_67637555_67655730	0/0	g0029	2	2	0	0	0	0	ACY3	chr11	67637555	67655730
ACY3_chr11_67637555_67655730	0/0	g0030	2	2	0	0	0	0	ACY3	chr11	67637555	67655730
ACY3_chr11_67637555_67655730	0/0	g0031	2	0	0	2	0	0	ACY3	chr11	67637555	67655730