JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ACY3_chr11_67637555_67655730	0/0	g0132	1	0	0	0	0	1	ACY3	chr11	67637555	67655730
ACY3_chr11_67637555_67655730	0/0	g0133	1	0	0	1	0	0	ACY3	chr11	67637555	67655730
ACY3_chr11_67637555_67655730	0/0	g0134	1	0	0	1	0	0	ACY3	chr11	67637555	67655730
ACY3_chr11_67637555_67655730	0/0	g0135	1	1	0	0	0	0	ACY3	chr11	67637555	67655730
ACY3_chr11_67637555_67655730	0/0	g0136	1	1	0	0	0	0	ACY3	chr11	67637555	67655730
ACY3_chr11_67637555_67655730	0/0	g0137	1	1	0	0	0	0	ACY3	chr11	67637555	67655730
ACY3_chr11_67637555_67655730	0/0	g0138	1	1	0	0	0	0	ACY3	chr11	67637555	67655730
ACY3_chr11_67637555_67655730	0/0	g0139	1	0	1	0	0	0	ACY3	chr11	67637555	67655730
ACY3_chr11_67637555_67655730	0/0	g0140	1	1	0	0	0	0	ACY3	chr11	67637555	67655730
ACY3_chr11_67637555_67655730	0/0	g0141	1	1	0	0	0	0	ACY3	chr11	67637555	67655730
ACY3_chr11_67637555_67655730	0/0	g0142	1	0	1	0	0	0	ACY3	chr11	67637555	67655730
ACYP1_chr14_75048243_75069024	0/1	g0001	44	8	5	23	2	5	ACYP1	chr14	75048243	75069024
ACYP1_chr14_75048243_75069024	0/0	g0002	33	5	10	12	0	6	ACYP1	chr14	75048243	75069024
ACYP1_chr14_75048243_75069024	0/0	g0003	21	2	6	6	3	4	ACYP1	chr14	75048243	75069024
ACYP1_chr14_75048243_75069024	0/0	g0004	16	11	0	0	1	4	ACYP1	chr14	75048243	75069024
ACYP1_chr14_75048243_75069024	0/0	g0005	7	0	0	7	0	0	ACYP1	chr14	75048243	75069024
ACYP1_chr14_75048243_75069024	0/0	g0006	6	1	3	0	1	1	ACYP1	chr14	75048243	75069024
ACYP1_chr14_75048243_75069024	0/0	g0007	6	6	0	0	0	0	ACYP1	chr14	75048243	75069024
ACYP1_chr14_75048243_75069024	0/0	g0008	5	1	1	3	0	0	ACYP1	chr14	75048243	75069024
ACYP1_chr14_75048243_75069024	0/0	g0009	5	0	3	0	0	2	ACYP1	chr14	75048243	75069024
ACYP1_chr14_75048243_75069024	0/0	g0010	4	4	0	0	0	0	ACYP1	chr14	75048243	75069024
ACYP1_chr14_75048243_75069024	0/0	g0011	4	0	1	0	0	3	ACYP1	chr14	75048243	75069024
ACYP1_chr14_75048243_75069024	0/0	g0012	4	2	0	1	0	1	ACYP1	chr14	75048243	75069024
ACYP1_chr14_75048243_75069024	0/0	g0013	4	1	1	0	2	0	ACYP1	chr14	75048243	75069024
ACYP1_chr14_75048243_75069024	0/0	g0014	4	0	3	1	0	0	ACYP1	chr14	75048243	75069024
ACYP1_chr14_75048243_75069024	0/0	g0015	4	0	1	3	0	0	ACYP1	chr14	75048243	75069024
ACYP1_chr14_75048243_75069024	0/0	g0016	4	0	1	2	0	1	ACYP1	chr14	75048243	75069024
ACYP1_chr14_75048243_75069024	0/0	g0017	3	1	1	0	0	1	ACYP1	chr14	75048243	75069024
ACYP1_chr14_75048243_75069024	0/0	g0018	3	3	0	0	0	0	ACYP1	chr14	75048243	75069024
ACYP1_chr14_75048243_75069024	0/0	g0019	3	2	1	0	0	0	ACYP1	chr14	75048243	75069024
ACYP1_chr14_75048243_75069024	0/0	g0020	3	1	1	0	1	0	ACYP1	chr14	75048243	75069024
ACYP1_chr14_75048243_75069024	0/0	g0021	3	1	0	2	0	0	ACYP1	chr14	75048243	75069024
ACYP1_chr14_75048243_75069024	0/0	g0022	3	0	1	0	0	2	ACYP1	chr14	75048243	75069024
ACYP1_chr14_75048243_75069024	0/0	g0023	3	1	0	0	1	1	ACYP1	chr14	75048243	75069024
ACYP1_chr14_75048243_75069024	0/0	g0024	3	1	0	1	0	1	ACYP1	chr14	75048243	75069024
ACYP1_chr14_75048243_75069024	0/0	g0025	3	1	0	2	0	0	ACYP1	chr14	75048243	75069024
ACYP1_chr14_75048243_75069024	0/0	g0026	2	0	0	0	2	0	ACYP1	chr14	75048243	75069024
ACYP1_chr14_75048243_75069024	0/0	g0027	2	2	0	0	0	0	ACYP1	chr14	75048243	75069024
ACYP1_chr14_75048243_75069024	0/0	g0028	2	2	0	0	0	0	ACYP1	chr14	75048243	75069024
ACYP1_chr14_75048243_75069024	0/0	g0029	2	0	1	1	0	0	ACYP1	chr14	75048243	75069024
ACYP1_chr14_75048243_75069024	0/0	g0030	2	0	0	2	0	0	ACYP1	chr14	75048243	75069024
ACYP1_chr14_75048243_75069024	0/0	g0031	2	1	1	0	0	0	ACYP1	chr14	75048243	75069024
ACYP1_chr14_75048243_75069024	0/0	g0032	2	1	0	0	0	1	ACYP1	chr14	75048243	75069024
ACYP1_chr14_75048243_75069024	0/0	g0033	2	0	0	2	0	0	ACYP1	chr14	75048243	75069024
ACYP1_chr14_75048243_75069024	0/0	g0034	2	0	0	2	0	0	ACYP1	chr14	75048243	75069024
ACYP1_chr14_75048243_75069024	1/0	g0035	2	0	1	0	0	0	ACYP1	chr14	75048243	75069024
ACYP1_chr14_75048243_75069024	0/0	g0036	2	0	0	2	0	0	ACYP1	chr14	75048243	75069024
ACYP1_chr14_75048243_75069024	0/0	g0037	2	0	0	2	0	0	ACYP1	chr14	75048243	75069024
ACYP1_chr14_75048243_75069024	0/0	g0038	2	0	0	2	0	0	ACYP1	chr14	75048243	75069024
ACYP1_chr14_75048243_75069024	0/0	g0039	2	0	1	1	0	0	ACYP1	chr14	75048243	75069024