JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
CDCA5_chr11_65072453_65089040	0/0	g0054	1	1	0	0	0	0	CDCA5	chr11	65072453	65089040
CDCA7L_chr7_21895899_21950899	0/0	g0001	7	0	0	7	0	0	CDCA7L	chr7	21895899	21950899
CDCA7L_chr7_21895899_21950899	0/0	g0002	6	0	5	1	0	0	CDCA7L	chr7	21895899	21950899
CDCA7L_chr7_21895899_21950899	0/0	g0003	4	0	4	0	0	0	CDCA7L	chr7	21895899	21950899
CDCA7L_chr7_21895899_21950899	0/0	g0004	3	0	0	3	0	0	CDCA7L	chr7	21895899	21950899
CDCA7L_chr7_21895899_21950899	0/0	g0005	3	0	2	1	0	0	CDCA7L	chr7	21895899	21950899
CDCA7L_chr7_21895899_21950899	0/0	g0006	3	0	0	3	0	0	CDCA7L	chr7	21895899	21950899
CDCA7L_chr7_21895899_21950899	0/0	g0007	3	0	0	3	0	0	CDCA7L	chr7	21895899	21950899
CDCA7L_chr7_21895899_21950899	0/0	g0008	3	3	0	0	0	0	CDCA7L	chr7	21895899	21950899
CDCA7L_chr7_21895899_21950899	0/0	g0009	3	3	0	0	0	0	CDCA7L	chr7	21895899	21950899
CDCA7L_chr7_21895899_21950899	0/0	g0010	2	0	0	2	0	0	CDCA7L	chr7	21895899	21950899
CDCA7L_chr7_21895899_21950899	0/0	g0011	2	0	0	2	0	0	CDCA7L	chr7	21895899	21950899
CDCA7L_chr7_21895899_21950899	0/0	g0012	2	0	1	0	1	0	CDCA7L	chr7	21895899	21950899
CDCA7L_chr7_21895899_21950899	0/0	g0013	2	0	1	0	0	1	CDCA7L	chr7	21895899	21950899
CDCA7L_chr7_21895899_21950899	0/0	g0014	2	0	0	2	0	0	CDCA7L	chr7	21895899	21950899
CDCA7L_chr7_21895899_21950899	0/0	g0015	2	0	2	0	0	0	CDCA7L	chr7	21895899	21950899
CDCA7L_chr7_21895899_21950899	0/0	g0016	2	0	0	2	0	0	CDCA7L	chr7	21895899	21950899
CDCA7L_chr7_21895899_21950899	0/0	g0017	2	0	0	0	0	2	CDCA7L	chr7	21895899	21950899
CDCA7L_chr7_21895899_21950899	0/0	g0018	2	0	0	2	0	0	CDCA7L	chr7	21895899	21950899
CDCA7L_chr7_21895899_21950899	0/0	g0019	2	0	0	2	0	0	CDCA7L	chr7	21895899	21950899
CDCA7L_chr7_21895899_21950899	0/0	g0020	2	2	0	0	0	0	CDCA7L	chr7	21895899	21950899
CDCA7L_chr7_21895899_21950899	0/0	g0021	2	0	2	0	0	0	CDCA7L	chr7	21895899	21950899
CDCA7L_chr7_21895899_21950899	0/0	g0022	2	2	0	0	0	0	CDCA7L	chr7	21895899	21950899
CDCA7L_chr7_21895899_21950899	0/0	g0023	2	0	2	0	0	0	CDCA7L	chr7	21895899	21950899
CDCA7L_chr7_21895899_21950899	0/0	g0024	2	0	0	2	0	0	CDCA7L	chr7	21895899	21950899
CDCA7L_chr7_21895899_21950899	0/0	g0025	2	0	2	0	0	0	CDCA7L	chr7	21895899	21950899
CDCA7L_chr7_21895899_21950899	0/0	g0026	2	0	0	2	0	0	CDCA7L	chr7	21895899	21950899
CDCA7L_chr7_21895899_21950899	0/0	g0027	1	1	0	0	0	0	CDCA7L	chr7	21895899	21950899
CDCA7L_chr7_21895899_21950899	0/0	g0028	1	1	0	0	0	0	CDCA7L	chr7	21895899	21950899
CDCA7L_chr7_21895899_21950899	0/0	g0029	1	1	0	0	0	0	CDCA7L	chr7	21895899	21950899
CDCA7L_chr7_21895899_21950899	0/0	g0030	1	1	0	0	0	0	CDCA7L	chr7	21895899	21950899
CDCA7L_chr7_21895899_21950899	0/0	g0031	1	1	0	0	0	0	CDCA7L	chr7	21895899	21950899
CDCA7L_chr7_21895899_21950899	1/0	g0032	1	0	0	0	0	0	CDCA7L	chr7	21895899	21950899
CDCA7L_chr7_21895899_21950899	0/0	g0033	1	1	0	0	0	0	CDCA7L	chr7	21895899	21950899
CDCA7L_chr7_21895899_21950899	0/0	g0034	1	0	1	0	0	0	CDCA7L	chr7	21895899	21950899
CDCA7L_chr7_21895899_21950899	0/0	g0035	1	1	0	0	0	0	CDCA7L	chr7	21895899	21950899
CDCA7L_chr7_21895899_21950899	0/0	g0036	1	0	0	1	0	0	CDCA7L	chr7	21895899	21950899
CDCA7L_chr7_21895899_21950899	0/0	g0037	1	1	0	0	0	0	CDCA7L	chr7	21895899	21950899
CDCA7L_chr7_21895899_21950899	0/0	g0038	1	1	0	0	0	0	CDCA7L	chr7	21895899	21950899
CDCA7L_chr7_21895899_21950899	0/0	g0039	1	0	1	0	0	0	CDCA7L	chr7	21895899	21950899
CDCA7L_chr7_21895899_21950899	0/0	g0040	1	1	0	0	0	0	CDCA7L	chr7	21895899	21950899
CDCA7L_chr7_21895899_21950899	0/0	g0041	1	1	0	0	0	0	CDCA7L	chr7	21895899	21950899
CDCA7L_chr7_21895899_21950899	0/0	g0042	1	1	0	0	0	0	CDCA7L	chr7	21895899	21950899
CDCA7L_chr7_21895899_21950899	0/0	g0043	1	1	0	0	0	0	CDCA7L	chr7	21895899	21950899
CDCA7L_chr7_21895899_21950899	0/0	g0044	1	0	0	1	0	0	CDCA7L	chr7	21895899	21950899
CDCA7L_chr7_21895899_21950899	0/0	g0045	1	0	0	1	0	0	CDCA7L	chr7	21895899	21950899
CDCA7L_chr7_21895899_21950899	0/0	g0046	1	0	0	1	0	0	CDCA7L	chr7	21895899	21950899
CDCA7L_chr7_21895899_21950899	0/0	g0047	1	0	0	1	0	0	CDCA7L	chr7	21895899	21950899
CDCA7L_chr7_21895899_21950899	0/0	g0048	1	0	0	1	0	0	CDCA7L	chr7	21895899	21950899
CDCA7L_chr7_21895899_21950899	0/0	g0049	1	0	0	1	0	0	CDCA7L	chr7	21895899	21950899