JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
CDK2AP1_chr12_123255976_123276856	0/0	g0096	1	1	0	0	0	0	CDK2AP1	chr12	123255976	123276856
CDK2AP1_chr12_123255976_123276856	0/0	g0097	1	1	0	0	0	0	CDK2AP1	chr12	123255976	123276856
CDK2AP1_chr12_123255976_123276856	0/0	g0098	1	1	0	0	0	0	CDK2AP1	chr12	123255976	123276856
CDK2AP1_chr12_123255976_123276856	0/0	g0099	1	1	0	0	0	0	CDK2AP1	chr12	123255976	123276856
CDK2AP1_chr12_123255976_123276856	0/0	g0100	1	1	0	0	0	0	CDK2AP1	chr12	123255976	123276856
CDK2AP1_chr12_123255976_123276856	0/0	g0101	1	1	0	0	0	0	CDK2AP1	chr12	123255976	123276856
CDK2AP1_chr12_123255976_123276856	0/0	g0102	1	1	0	0	0	0	CDK2AP1	chr12	123255976	123276856
CDK2AP1_chr12_123255976_123276856	0/0	g0103	1	1	0	0	0	0	CDK2AP1	chr12	123255976	123276856
CDK2AP1_chr12_123255976_123276856	0/0	g0104	1	1	0	0	0	0	CDK2AP1	chr12	123255976	123276856
CDK2AP1_chr12_123255976_123276856	0/0	g0105	1	1	0	0	0	0	CDK2AP1	chr12	123255976	123276856
CDK2AP1_chr12_123255976_123276856	0/0	g0106	1	1	0	0	0	0	CDK2AP1	chr12	123255976	123276856
CDK2AP1_chr12_123255976_123276856	0/0	g0107	1	1	0	0	0	0	CDK2AP1	chr12	123255976	123276856
CDK2AP1_chr12_123255976_123276856	0/0	g0108	1	1	0	0	0	0	CDK2AP1	chr12	123255976	123276856
CDK2AP1_chr12_123255976_123276856	0/0	g0109	1	1	0	0	0	0	CDK2AP1	chr12	123255976	123276856
CDK2AP1_chr12_123255976_123276856	0/0	g0110	1	1	0	0	0	0	CDK2AP1	chr12	123255976	123276856
CDK2AP1_chr12_123255976_123276856	0/0	g0111	1	1	0	0	0	0	CDK2AP1	chr12	123255976	123276856
CDK2AP1_chr12_123255976_123276856	0/0	g0112	1	1	0	0	0	0	CDK2AP1	chr12	123255976	123276856
CDK2AP1_chr12_123255976_123276856	0/0	g0113	1	1	0	0	0	0	CDK2AP1	chr12	123255976	123276856
CDK2AP1_chr12_123255976_123276856	0/0	g0114	1	1	0	0	0	0	CDK2AP1	chr12	123255976	123276856
CDK2AP1_chr12_123255976_123276856	0/0	g0115	1	0	0	1	0	0	CDK2AP1	chr12	123255976	123276856
CDK2AP1_chr12_123255976_123276856	0/0	g0116	1	1	0	0	0	0	CDK2AP1	chr12	123255976	123276856
CDK2AP1_chr12_123255976_123276856	0/0	g0117	1	0	0	1	0	0	CDK2AP1	chr12	123255976	123276856
CDK2AP1_chr12_123255976_123276856	0/0	g0118	1	0	0	1	0	0	CDK2AP1	chr12	123255976	123276856
CDK2AP1_chr12_123255976_123276856	0/0	g0119	1	0	0	1	0	0	CDK2AP1	chr12	123255976	123276856
CDK2AP1_chr12_123255976_123276856	0/0	g0120	1	0	0	1	0	0	CDK2AP1	chr12	123255976	123276856
CDK2AP1_chr12_123255976_123276856	0/0	g0121	1	0	0	1	0	0	CDK2AP1	chr12	123255976	123276856
CDK2AP1_chr12_123255976_123276856	0/0	g0122	1	0	0	1	0	0	CDK2AP1	chr12	123255976	123276856
CDK2AP1_chr12_123255976_123276856	0/0	g0123	1	0	1	0	0	0	CDK2AP1	chr12	123255976	123276856
CDK2AP1_chr12_123255976_123276856	0/0	g0124	1	1	0	0	0	0	CDK2AP1	chr12	123255976	123276856
CDK2AP1_chr12_123255976_123276856	0/0	g0125	1	0	0	1	0	0	CDK2AP1	chr12	123255976	123276856
CDK2AP1_chr12_123255976_123276856	0/0	g0126	1	0	0	0	0	1	CDK2AP1	chr12	123255976	123276856
CDK2AP1_chr12_123255976_123276856	0/0	g0127	1	0	1	0	0	0	CDK2AP1	chr12	123255976	123276856
CDK2AP1_chr12_123255976_123276856	0/0	g0128	1	0	0	1	0	0	CDK2AP1	chr12	123255976	123276856
CDK2AP1_chr12_123255976_123276856	0/0	g0129	1	0	0	0	1	0	CDK2AP1	chr12	123255976	123276856
CDK2AP1_chr12_123255976_123276856	0/0	g0130	1	1	0	0	0	0	CDK2AP1	chr12	123255976	123276856
CDK2AP1_chr12_123255976_123276856	0/0	g0131	1	1	0	0	0	0	CDK2AP1	chr12	123255976	123276856
CDK2AP1_chr12_123255976_123276856	0/0	g0132	1	0	1	0	0	0	CDK2AP1	chr12	123255976	123276856
CDK2AP1_chr12_123255976_123276856	0/0	g0133	1	0	1	0	0	0	CDK2AP1	chr12	123255976	123276856
CDK2AP2_chr11_67501497_67513162	1/1	g0001	265	52	56	106	17	32	CDK2AP2	chr11	67501497	67513162
CDK2AP2_chr11_67501497_67513162	0/0	g0002	20	19	1	0	0	0	CDK2AP2	chr11	67501497	67513162
CDK2AP2_chr11_67501497_67513162	0/0	g0003	15	15	0	0	0	0	CDK2AP2	chr11	67501497	67513162
CDK2AP2_chr11_67501497_67513162	0/0	g0004	4	0	0	3	0	1	CDK2AP2	chr11	67501497	67513162
CDK2AP2_chr11_67501497_67513162	0/0	g0005	2	0	2	0	0	0	CDK2AP2	chr11	67501497	67513162
CDK2AP2_chr11_67501497_67513162	0/0	g0006	2	2	0	0	0	0	CDK2AP2	chr11	67501497	67513162
CDK2AP2_chr11_67501497_67513162	0/0	g0007	1	1	0	0	0	0	CDK2AP2	chr11	67501497	67513162
CDK2AP2_chr11_67501497_67513162	0/0	g0008	1	0	0	0	0	1	CDK2AP2	chr11	67501497	67513162
CDK2AP2_chr11_67501497_67513162	0/0	g0009	1	0	0	0	1	0	CDK2AP2	chr11	67501497	67513162
CDK2AP2_chr11_67501497_67513162	0/0	g0010	1	0	1	0	0	0	CDK2AP2	chr11	67501497	67513162
CDK2AP2_chr11_67501497_67513162	0/0	g0011	1	1	0	0	0	0	CDK2AP2	chr11	67501497	67513162
CDK2AP2_chr11_67501497_67513162	0/0	g0012	1	1	0	0	0	0	CDK2AP2	chr11	67501497	67513162