JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
CEBPE_chr14_23112306_23124255	0/0	g0012	1	0	0	0	1	0	CEBPE	chr14	23112306	23124255
CEBPE_chr14_23112306_23124255	0/0	g0013	1	0	1	0	0	0	CEBPE	chr14	23112306	23124255
CEBPE_chr14_23112306_23124255	0/0	g0014	1	1	0	0	0	0	CEBPE	chr14	23112306	23124255
CEBPE_chr14_23112306_23124255	0/0	g0015	1	0	0	0	0	1	CEBPE	chr14	23112306	23124255
CEBPE_chr14_23112306_23124255	0/0	g0016	1	0	0	0	1	0	CEBPE	chr14	23112306	23124255
CEBPE_chr14_23112306_23124255	0/0	g0017	1	1	0	0	0	0	CEBPE	chr14	23112306	23124255
CEBPE_chr14_23112306_23124255	0/0	g0018	1	1	0	0	0	0	CEBPE	chr14	23112306	23124255
CEBPE_chr14_23112306_23124255	0/0	g0019	1	0	1	0	0	0	CEBPE	chr14	23112306	23124255
CEBPE_chr14_23112306_23124255	0/0	g0020	1	0	0	1	0	0	CEBPE	chr14	23112306	23124255
CEBPE_chr14_23112306_23124255	0/0	g0021	1	1	0	0	0	0	CEBPE	chr14	23112306	23124255
CEBPG_chr19_33368709_33387686	1/0	g0001	166	21	24	94	5	21	CEBPG	chr19	33368709	33387686
CEBPG_chr19_33368709_33387686	0/0	g0002	74	17	10	37	5	5	CEBPG	chr19	33368709	33387686
CEBPG_chr19_33368709_33387686	0/0	g0003	56	6	1	42	1	6	CEBPG	chr19	33368709	33387686
CEBPG_chr19_33368709_33387686	0/1	g0004	30	3	22	0	3	1	CEBPG	chr19	33368709	33387686
CEBPG_chr19_33368709_33387686	0/0	g0005	28	1	4	19	0	4	CEBPG	chr19	33368709	33387686
CEBPG_chr19_33368709_33387686	0/0	g0006	23	19	4	0	0	0	CEBPG	chr19	33368709	33387686
CEBPG_chr19_33368709_33387686	0/0	g0007	12	12	0	0	0	0	CEBPG	chr19	33368709	33387686
CEBPG_chr19_33368709_33387686	0/0	g0008	7	1	0	4	1	1	CEBPG	chr19	33368709	33387686
CEBPG_chr19_33368709_33387686	0/0	g0009	5	5	0	0	0	0	CEBPG	chr19	33368709	33387686
CEBPG_chr19_33368709_33387686	0/0	g0010	3	3	0	0	0	0	CEBPG	chr19	33368709	33387686
CEBPG_chr19_33368709_33387686	0/0	g0011	2	0	0	2	0	0	CEBPG	chr19	33368709	33387686
CEBPG_chr19_33368709_33387686	0/0	g0012	2	0	1	0	1	0	CEBPG	chr19	33368709	33387686
CEBPG_chr19_33368709_33387686	0/0	g0013	2	0	0	2	0	0	CEBPG	chr19	33368709	33387686
CEBPG_chr19_33368709_33387686	0/0	g0014	2	2	0	0	0	0	CEBPG	chr19	33368709	33387686
CEBPG_chr19_33368709_33387686	0/0	g0015	2	2	0	0	0	0	CEBPG	chr19	33368709	33387686
CEBPG_chr19_33368709_33387686	0/0	g0016	1	0	0	1	0	0	CEBPG	chr19	33368709	33387686
CEBPG_chr19_33368709_33387686	0/0	g0017	1	0	0	0	0	1	CEBPG	chr19	33368709	33387686
CEBPG_chr19_33368709_33387686	0/0	g0018	1	0	0	1	0	0	CEBPG	chr19	33368709	33387686
CEBPG_chr19_33368709_33387686	0/0	g0019	1	0	0	1	0	0	CEBPG	chr19	33368709	33387686
CEBPG_chr19_33368709_33387686	0/0	g0020	1	0	0	0	0	1	CEBPG	chr19	33368709	33387686
CEBPG_chr19_33368709_33387686	0/0	g0021	1	0	0	1	0	0	CEBPG	chr19	33368709	33387686
CEBPG_chr19_33368709_33387686	0/0	g0022	1	1	0	0	0	0	CEBPG	chr19	33368709	33387686
CEBPG_chr19_33368709_33387686	0/0	g0023	1	1	0	0	0	0	CEBPG	chr19	33368709	33387686
CEBPG_chr19_33368709_33387686	0/0	g0024	1	0	1	0	0	0	CEBPG	chr19	33368709	33387686
CEBPG_chr19_33368709_33387686	0/0	g0025	1	0	1	0	0	0	CEBPG	chr19	33368709	33387686
CEBPG_chr19_33368709_33387686	0/0	g0026	1	0	0	0	0	1	CEBPG	chr19	33368709	33387686
CEBPG_chr19_33368709_33387686	0/0	g0027	1	0	0	1	0	0	CEBPG	chr19	33368709	33387686
CEBPG_chr19_33368709_33387686	0/0	g0028	1	0	1	0	0	0	CEBPG	chr19	33368709	33387686
CEBPG_chr19_33368709_33387686	0/0	g0029	1	0	1	0	0	0	CEBPG	chr19	33368709	33387686
CEBPG_chr19_33368709_33387686	0/0	g0030	1	0	1	0	0	0	CEBPG	chr19	33368709	33387686
CEBPG_chr19_33368709_33387686	0/0	g0031	1	0	0	1	0	0	CEBPG	chr19	33368709	33387686
CEBPG_chr19_33368709_33387686	0/0	g0032	1	0	0	1	0	0	CEBPG	chr19	33368709	33387686
CEBPG_chr19_33368709_33387686	0/0	g0033	1	1	0	0	0	0	CEBPG	chr19	33368709	33387686
CEBPG_chr19_33368709_33387686	0/0	g0034	1	0	0	1	0	0	CEBPG	chr19	33368709	33387686
CEBPG_chr19_33368709_33387686	0/0	g0035	1	0	1	0	0	0	CEBPG	chr19	33368709	33387686
CEBPG_chr19_33368709_33387686	0/0	g0036	1	0	0	0	0	1	CEBPG	chr19	33368709	33387686
CEBPG_chr19_33368709_33387686	0/0	g0037	1	1	0	0	0	0	CEBPG	chr19	33368709	33387686
CEBPZOS_chr2_37191496_37209743	0/0	g0001	105	0	14	82	4	5	CEBPZOS	chr2	37191496	37209743
CEBPZOS_chr2_37191496_37209743	0/0	g0002	94	1	11	81	0	1	CEBPZOS	chr2	37191496	37209743
CEBPZOS_chr2_37191496_37209743	0/0	g0003	44	28	8	7	0	1	CEBPZOS	chr2	37191496	37209743