JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
CEBPZOS_chr2_37191496_37209743	1/0	g0004	39	8	12	9	2	7	CEBPZOS	chr2	37191496	37209743
CEBPZOS_chr2_37191496_37209743	0/0	g0005	38	7	13	9	1	8	CEBPZOS	chr2	37191496	37209743
CEBPZOS_chr2_37191496_37209743	0/0	g0006	34	5	4	14	1	10	CEBPZOS	chr2	37191496	37209743
CEBPZOS_chr2_37191496_37209743	0/0	g0007	16	0	0	16	0	0	CEBPZOS	chr2	37191496	37209743
CEBPZOS_chr2_37191496_37209743	0/1	g0008	12	1	6	0	4	0	CEBPZOS	chr2	37191496	37209743
CEBPZOS_chr2_37191496_37209743	0/0	g0009	8	8	0	0	0	0	CEBPZOS	chr2	37191496	37209743
CEBPZOS_chr2_37191496_37209743	0/0	g0010	6	0	2	0	2	2	CEBPZOS	chr2	37191496	37209743
CEBPZOS_chr2_37191496_37209743	0/0	g0011	6	0	3	0	0	3	CEBPZOS	chr2	37191496	37209743
CEBPZOS_chr2_37191496_37209743	0/0	g0012	6	6	0	0	0	0	CEBPZOS	chr2	37191496	37209743
CEBPZOS_chr2_37191496_37209743	0/0	g0013	5	5	0	0	0	0	CEBPZOS	chr2	37191496	37209743
CEBPZOS_chr2_37191496_37209743	0/0	g0014	5	5	0	0	0	0	CEBPZOS	chr2	37191496	37209743
CEBPZOS_chr2_37191496_37209743	0/0	g0015	5	5	0	0	0	0	CEBPZOS	chr2	37191496	37209743
CEBPZOS_chr2_37191496_37209743	0/0	g0016	4	1	0	0	2	1	CEBPZOS	chr2	37191496	37209743
CEBPZOS_chr2_37191496_37209743	0/0	g0017	4	0	0	4	0	0	CEBPZOS	chr2	37191496	37209743
CEBPZOS_chr2_37191496_37209743	0/0	g0018	3	3	0	0	0	0	CEBPZOS	chr2	37191496	37209743
CEBPZOS_chr2_37191496_37209743	0/0	g0019	3	0	0	3	0	0	CEBPZOS	chr2	37191496	37209743
CEBPZOS_chr2_37191496_37209743	0/0	g0020	3	0	0	3	0	0	CEBPZOS	chr2	37191496	37209743
CEBPZOS_chr2_37191496_37209743	0/0	g0021	2	0	0	2	0	0	CEBPZOS	chr2	37191496	37209743
CEBPZOS_chr2_37191496_37209743	0/0	g0022	2	0	0	1	0	1	CEBPZOS	chr2	37191496	37209743
CEBPZOS_chr2_37191496_37209743	0/0	g0023	2	2	0	0	0	0	CEBPZOS	chr2	37191496	37209743
CEBPZOS_chr2_37191496_37209743	0/0	g0024	2	2	0	0	0	0	CEBPZOS	chr2	37191496	37209743
CEBPZOS_chr2_37191496_37209743	0/0	g0025	1	0	1	0	0	0	CEBPZOS	chr2	37191496	37209743
CEBPZOS_chr2_37191496_37209743	0/0	g0026	1	1	0	0	0	0	CEBPZOS	chr2	37191496	37209743
CEBPZOS_chr2_37191496_37209743	0/0	g0027	1	1	0	0	0	0	CEBPZOS	chr2	37191496	37209743
CEBPZOS_chr2_37191496_37209743	0/0	g0028	1	1	0	0	0	0	CEBPZOS	chr2	37191496	37209743
CEBPZOS_chr2_37191496_37209743	0/0	g0029	1	0	0	0	0	1	CEBPZOS	chr2	37191496	37209743
CEBPZOS_chr2_37191496_37209743	0/0	g0030	1	0	0	1	0	0	CEBPZOS	chr2	37191496	37209743
CEBPZOS_chr2_37191496_37209743	0/0	g0031	1	0	0	0	0	1	CEBPZOS	chr2	37191496	37209743
CEBPZOS_chr2_37191496_37209743	0/0	g0032	1	0	0	0	0	1	CEBPZOS	chr2	37191496	37209743
CEBPZOS_chr2_37191496_37209743	0/0	g0033	1	0	0	1	0	0	CEBPZOS	chr2	37191496	37209743
CEBPZOS_chr2_37191496_37209743	0/0	g0034	1	1	0	0	0	0	CEBPZOS	chr2	37191496	37209743
CEBPZOS_chr2_37191496_37209743	0/0	g0035	1	0	1	0	0	0	CEBPZOS	chr2	37191496	37209743
CEBPZOS_chr2_37191496_37209743	0/0	g0036	1	0	1	0	0	0	CEBPZOS	chr2	37191496	37209743
CEBPZOS_chr2_37191496_37209743	0/0	g0037	1	1	0	0	0	0	CEBPZOS	chr2	37191496	37209743
CEBPZOS_chr2_37191496_37209743	0/0	g0038	1	0	0	0	0	1	CEBPZOS	chr2	37191496	37209743
CEBPZOS_chr2_37191496_37209743	0/0	g0039	1	0	0	0	0	1	CEBPZOS	chr2	37191496	37209743
CEBPZOS_chr2_37191496_37209743	0/0	g0040	1	1	0	0	0	0	CEBPZOS	chr2	37191496	37209743
CEBPZOS_chr2_37191496_37209743	0/0	g0041	1	0	0	1	0	0	CEBPZOS	chr2	37191496	37209743
CEBPZOS_chr2_37191496_37209743	0/0	g0042	1	1	0	0	0	0	CEBPZOS	chr2	37191496	37209743
CEBPZ_chr2_37196612_37236596	0/0	g0001	16	0	3	13	0	0	CEBPZ	chr2	37196612	37236596
CEBPZ_chr2_37196612_37236596	0/0	g0002	14	0	0	14	0	0	CEBPZ	chr2	37196612	37236596
CEBPZ_chr2_37196612_37236596	0/0	g0003	11	0	1	10	0	0	CEBPZ	chr2	37196612	37236596
CEBPZ_chr2_37196612_37236596	0/1	g0004	9	1	5	0	2	0	CEBPZ	chr2	37196612	37236596
CEBPZ_chr2_37196612_37236596	0/0	g0005	8	0	4	2	2	0	CEBPZ	chr2	37196612	37236596
CEBPZ_chr2_37196612_37236596	0/0	g0006	7	4	2	1	0	0	CEBPZ	chr2	37196612	37236596
CEBPZ_chr2_37196612_37236596	0/0	g0007	6	0	0	6	0	0	CEBPZ	chr2	37196612	37236596
CEBPZ_chr2_37196612_37236596	0/0	g0008	5	0	5	0	0	0	CEBPZ	chr2	37196612	37236596
CEBPZ_chr2_37196612_37236596	0/0	g0009	5	0	0	5	0	0	CEBPZ	chr2	37196612	37236596
CEBPZ_chr2_37196612_37236596	0/0	g0010	5	0	0	5	0	0	CEBPZ	chr2	37196612	37236596
CEBPZ_chr2_37196612_37236596	0/0	g0011	5	0	5	0	0	0	CEBPZ	chr2	37196612	37236596