JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
CELA2B_chr1_15471104_15496395	0/0	g0167	1	1	0	0	0	0	CELA2B	chr1	15471104	15496395
CELA2B_chr1_15471104_15496395	0/0	g0168	1	1	0	0	0	0	CELA2B	chr1	15471104	15496395
CELA2B_chr1_15471104_15496395	0/0	g0169	1	1	0	0	0	0	CELA2B	chr1	15471104	15496395
CELA2B_chr1_15471104_15496395	0/0	g0170	1	1	0	0	0	0	CELA2B	chr1	15471104	15496395
CELA2B_chr1_15471104_15496395	0/0	g0171	1	1	0	0	0	0	CELA2B	chr1	15471104	15496395
CELA2B_chr1_15471104_15496395	0/0	g0172	1	1	0	0	0	0	CELA2B	chr1	15471104	15496395
CELA2B_chr1_15471104_15496395	0/0	g0173	1	1	0	0	0	0	CELA2B	chr1	15471104	15496395
CELA2B_chr1_15471104_15496395	0/0	g0174	1	1	0	0	0	0	CELA2B	chr1	15471104	15496395
CELA2B_chr1_15471104_15496395	0/0	g0175	1	1	0	0	0	0	CELA2B	chr1	15471104	15496395
CELA2B_chr1_15471104_15496395	0/0	g0176	1	1	0	0	0	0	CELA2B	chr1	15471104	15496395
CELA2B_chr1_15471104_15496395	0/0	g0177	1	1	0	0	0	0	CELA2B	chr1	15471104	15496395
CELA2B_chr1_15471104_15496395	0/0	g0178	1	0	1	0	0	0	CELA2B	chr1	15471104	15496395
CELA2B_chr1_15471104_15496395	0/0	g0179	1	0	1	0	0	0	CELA2B	chr1	15471104	15496395
CELA2B_chr1_15471104_15496395	0/0	g0180	1	1	0	0	0	0	CELA2B	chr1	15471104	15496395
CELA2B_chr1_15471104_15496395	0/0	g0181	1	1	0	0	0	0	CELA2B	chr1	15471104	15496395
CELA2B_chr1_15471104_15496395	0/0	g0182	1	1	0	0	0	0	CELA2B	chr1	15471104	15496395
CELA2B_chr1_15471104_15496395	0/0	g0183	1	1	0	0	0	0	CELA2B	chr1	15471104	15496395
CELA3A_chr1_21996657_22017542	0/0	g0001	51	13	2	32	1	3	CELA3A	chr1	21996657	22017542
CELA3A_chr1_21996657_22017542	0/0	g0002	33	0	6	20	1	6	CELA3A	chr1	21996657	22017542
CELA3A_chr1_21996657_22017542	0/0	g0003	18	0	0	18	0	0	CELA3A	chr1	21996657	22017542
CELA3A_chr1_21996657_22017542	0/0	g0004	16	1	5	6	1	3	CELA3A	chr1	21996657	22017542
CELA3A_chr1_21996657_22017542	0/0	g0005	10	4	3	0	0	3	CELA3A	chr1	21996657	22017542
CELA3A_chr1_21996657_22017542	0/0	g0006	10	4	2	3	0	1	CELA3A	chr1	21996657	22017542
CELA3A_chr1_21996657_22017542	0/1	g0007	9	0	1	0	2	5	CELA3A	chr1	21996657	22017542
CELA3A_chr1_21996657_22017542	0/0	g0008	7	0	0	7	0	0	CELA3A	chr1	21996657	22017542
CELA3A_chr1_21996657_22017542	0/0	g0009	7	0	5	0	0	2	CELA3A	chr1	21996657	22017542
CELA3A_chr1_21996657_22017542	0/0	g0010	6	5	0	0	0	1	CELA3A	chr1	21996657	22017542
CELA3A_chr1_21996657_22017542	0/0	g0011	6	5	1	0	0	0	CELA3A	chr1	21996657	22017542
CELA3A_chr1_21996657_22017542	0/0	g0012	6	0	0	6	0	0	CELA3A	chr1	21996657	22017542
CELA3A_chr1_21996657_22017542	0/0	g0013	6	0	1	5	0	0	CELA3A	chr1	21996657	22017542
CELA3A_chr1_21996657_22017542	0/0	g0014	5	0	4	0	1	0	CELA3A	chr1	21996657	22017542
CELA3A_chr1_21996657_22017542	0/0	g0015	5	0	1	0	2	2	CELA3A	chr1	21996657	22017542
CELA3A_chr1_21996657_22017542	0/0	g0016	5	0	5	0	0	0	CELA3A	chr1	21996657	22017542
CELA3A_chr1_21996657_22017542	0/0	g0017	5	0	0	5	0	0	CELA3A	chr1	21996657	22017542
CELA3A_chr1_21996657_22017542	0/0	g0018	5	4	1	0	0	0	CELA3A	chr1	21996657	22017542
CELA3A_chr1_21996657_22017542	0/0	g0019	5	0	5	0	0	0	CELA3A	chr1	21996657	22017542
CELA3A_chr1_21996657_22017542	0/0	g0020	4	0	2	2	0	0	CELA3A	chr1	21996657	22017542
CELA3A_chr1_21996657_22017542	0/0	g0021	4	0	0	3	0	1	CELA3A	chr1	21996657	22017542
CELA3A_chr1_21996657_22017542	0/0	g0022	4	0	0	4	0	0	CELA3A	chr1	21996657	22017542
CELA3A_chr1_21996657_22017542	0/0	g0023	4	4	0	0	0	0	CELA3A	chr1	21996657	22017542
CELA3A_chr1_21996657_22017542	0/0	g0024	3	2	1	0	0	0	CELA3A	chr1	21996657	22017542
CELA3A_chr1_21996657_22017542	0/0	g0025	3	0	0	3	0	0	CELA3A	chr1	21996657	22017542
CELA3A_chr1_21996657_22017542	0/0	g0026	3	0	0	3	0	0	CELA3A	chr1	21996657	22017542
CELA3A_chr1_21996657_22017542	0/0	g0027	3	0	3	0	0	0	CELA3A	chr1	21996657	22017542
CELA3A_chr1_21996657_22017542	0/0	g0028	2	2	0	0	0	0	CELA3A	chr1	21996657	22017542
CELA3A_chr1_21996657_22017542	0/0	g0029	2	0	1	0	1	0	CELA3A	chr1	21996657	22017542
CELA3A_chr1_21996657_22017542	0/0	g0030	2	0	0	2	0	0	CELA3A	chr1	21996657	22017542
CELA3A_chr1_21996657_22017542	0/0	g0031	2	1	0	0	1	0	CELA3A	chr1	21996657	22017542
CELA3A_chr1_21996657_22017542	0/0	g0032	2	0	1	0	1	0	CELA3A	chr1	21996657	22017542
CELA3A_chr1_21996657_22017542	0/0	g0033	2	0	0	0	0	2	CELA3A	chr1	21996657	22017542