JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
CELSR3_chr3_48631463_48667886	0/0	g0056	1	0	0	0	0	1	CELSR3	chr3	48631463	48667886
CELSR3_chr3_48631463_48667886	0/0	g0057	1	0	0	1	0	0	CELSR3	chr3	48631463	48667886
CELSR3_chr3_48631463_48667886	0/0	g0058	1	0	0	1	0	0	CELSR3	chr3	48631463	48667886
CELSR3_chr3_48631463_48667886	0/0	g0059	1	0	1	0	0	0	CELSR3	chr3	48631463	48667886
CELSR3_chr3_48631463_48667886	0/0	g0060	1	0	1	0	0	0	CELSR3	chr3	48631463	48667886
CELSR3_chr3_48631463_48667886	0/0	g0061	1	1	0	0	0	0	CELSR3	chr3	48631463	48667886
CELSR3_chr3_48631463_48667886	0/0	g0062	1	1	0	0	0	0	CELSR3	chr3	48631463	48667886
CELSR3_chr3_48631463_48667886	0/0	g0063	1	0	0	1	0	0	CELSR3	chr3	48631463	48667886
CELSR3_chr3_48631463_48667886	0/0	g0064	1	0	0	1	0	0	CELSR3	chr3	48631463	48667886
CELSR3_chr3_48631463_48667886	0/0	g0065	1	0	1	0	0	0	CELSR3	chr3	48631463	48667886
CELSR3_chr3_48631463_48667886	0/0	g0066	1	0	0	1	0	0	CELSR3	chr3	48631463	48667886
CELSR3_chr3_48631463_48667886	0/0	g0067	1	0	0	1	0	0	CELSR3	chr3	48631463	48667886
CELSR3_chr3_48631463_48667886	0/0	g0068	1	0	0	1	0	0	CELSR3	chr3	48631463	48667886
CELSR3_chr3_48631463_48667886	0/0	g0069	1	1	0	0	0	0	CELSR3	chr3	48631463	48667886
CELSR3_chr3_48631463_48667886	0/0	g0070	1	0	0	1	0	0	CELSR3	chr3	48631463	48667886
CELSR3_chr3_48631463_48667886	0/0	g0071	1	0	0	1	0	0	CELSR3	chr3	48631463	48667886
CELSR3_chr3_48631463_48667886	0/0	g0072	1	0	0	1	0	0	CELSR3	chr3	48631463	48667886
CELSR3_chr3_48631463_48667886	0/0	g0073	1	1	0	0	0	0	CELSR3	chr3	48631463	48667886
CELSR3_chr3_48631463_48667886	0/0	g0074	1	1	0	0	0	0	CELSR3	chr3	48631463	48667886
CELSR3_chr3_48631463_48667886	0/0	g0075	1	1	0	0	0	0	CELSR3	chr3	48631463	48667886
CELSR3_chr3_48631463_48667886	0/0	g0076	1	1	0	0	0	0	CELSR3	chr3	48631463	48667886
CELSR3_chr3_48631463_48667886	0/0	g0077	1	1	0	0	0	0	CELSR3	chr3	48631463	48667886
CELSR3_chr3_48631463_48667886	0/0	g0078	1	1	0	0	0	0	CELSR3	chr3	48631463	48667886
CELSR3_chr3_48631463_48667886	0/0	g0079	1	1	0	0	0	0	CELSR3	chr3	48631463	48667886
CELSR3_chr3_48631463_48667886	0/0	g0080	1	1	0	0	0	0	CELSR3	chr3	48631463	48667886
CELSR3_chr3_48631463_48667886	0/0	g0081	1	1	0	0	0	0	CELSR3	chr3	48631463	48667886
CELSR3_chr3_48631463_48667886	0/0	g0082	1	1	0	0	0	0	CELSR3	chr3	48631463	48667886
CELSR3_chr3_48631463_48667886	0/0	g0083	1	1	0	0	0	0	CELSR3	chr3	48631463	48667886
CELSR3_chr3_48631463_48667886	0/0	g0084	1	1	0	0	0	0	CELSR3	chr3	48631463	48667886
CELSR3_chr3_48631463_48667886	0/0	g0085	1	1	0	0	0	0	CELSR3	chr3	48631463	48667886
CELSR3_chr3_48631463_48667886	0/0	g0086	1	1	0	0	0	0	CELSR3	chr3	48631463	48667886
CELSR3_chr3_48631463_48667886	0/0	g0087	1	1	0	0	0	0	CELSR3	chr3	48631463	48667886
CELSR3_chr3_48631463_48667886	0/0	g0088	1	0	1	0	0	0	CELSR3	chr3	48631463	48667886
CELSR3_chr3_48631463_48667886	0/0	g0089	1	0	0	0	1	0	CELSR3	chr3	48631463	48667886
CELSR3_chr3_48631463_48667886	0/0	g0090	1	0	1	0	0	0	CELSR3	chr3	48631463	48667886
CELSR3_chr3_48631463_48667886	0/0	g0091	1	1	0	0	0	0	CELSR3	chr3	48631463	48667886
CELSR3_chr3_48631463_48667886	0/0	g0092	1	1	0	0	0	0	CELSR3	chr3	48631463	48667886
CELSR3_chr3_48631463_48667886	0/0	g0093	1	0	0	1	0	0	CELSR3	chr3	48631463	48667886
CELSR3_chr3_48631463_48667886	0/0	g0094	1	1	0	0	0	0	CELSR3	chr3	48631463	48667886
CELSR3_chr3_48631463_48667886	0/0	g0095	1	0	0	1	0	0	CELSR3	chr3	48631463	48667886
CELSR3_chr3_48631463_48667886	0/0	g0096	1	1	0	0	0	0	CELSR3	chr3	48631463	48667886
CELSR3_chr3_48631463_48667886	0/0	g0097	1	1	0	0	0	0	CELSR3	chr3	48631463	48667886
CEL_chr9_133056981_133076861	1/0	g0001	130	29	23	55	8	14	CEL	chr9	133056981	133076861
CEL_chr9_133056981_133076861	0/0	g0002	51	1	19	26	4	1	CEL	chr9	133056981	133076861
CEL_chr9_133056981_133076861	0/1	g0003	48	0	11	34	0	2	CEL	chr9	133056981	133076861
CEL_chr9_133056981_133076861	0/0	g0004	14	0	0	13	0	1	CEL	chr9	133056981	133076861
CEL_chr9_133056981_133076861	0/0	g0005	10	4	4	0	1	1	CEL	chr9	133056981	133076861
CEL_chr9_133056981_133076861	0/0	g0006	9	9	0	0	0	0	CEL	chr9	133056981	133076861
CEL_chr9_133056981_133076861	0/0	g0007	8	1	5	0	2	0	CEL	chr9	133056981	133076861
CEL_chr9_133056981_133076861	0/0	g0008	7	2	1	4	0	0	CEL	chr9	133056981	133076861