JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
CEP162_chr6_84119250_84232643	0/0	g0195	1	1	0	0	0	0	CEP162	chr6	84119250	84232643
CEP162_chr6_84119250_84232643	0/0	g0196	1	1	0	0	0	0	CEP162	chr6	84119250	84232643
CEP162_chr6_84119250_84232643	0/0	g0197	1	1	0	0	0	0	CEP162	chr6	84119250	84232643
CEP162_chr6_84119250_84232643	0/0	g0198	1	1	0	0	0	0	CEP162	chr6	84119250	84232643
CEP162_chr6_84119250_84232643	0/0	g0199	1	1	0	0	0	0	CEP162	chr6	84119250	84232643
CEP162_chr6_84119250_84232643	0/0	g0200	1	1	0	0	0	0	CEP162	chr6	84119250	84232643
CEP162_chr6_84119250_84232643	0/0	g0201	1	1	0	0	0	0	CEP162	chr6	84119250	84232643
CEP162_chr6_84119250_84232643	0/0	g0202	1	1	0	0	0	0	CEP162	chr6	84119250	84232643
CEP162_chr6_84119250_84232643	0/0	g0203	1	1	0	0	0	0	CEP162	chr6	84119250	84232643
CEP162_chr6_84119250_84232643	0/0	g0204	1	1	0	0	0	0	CEP162	chr6	84119250	84232643
CEP162_chr6_84119250_84232643	0/0	g0205	1	1	0	0	0	0	CEP162	chr6	84119250	84232643
CEP162_chr6_84119250_84232643	0/0	g0206	1	1	0	0	0	0	CEP162	chr6	84119250	84232643
CEP162_chr6_84119250_84232643	0/0	g0207	1	0	1	0	0	0	CEP162	chr6	84119250	84232643
CEP162_chr6_84119250_84232643	0/0	g0208	1	1	0	0	0	0	CEP162	chr6	84119250	84232643
CEP162_chr6_84119250_84232643	0/0	g0209	1	1	0	0	0	0	CEP162	chr6	84119250	84232643
CEP162_chr6_84119250_84232643	0/0	g0210	1	1	0	0	0	0	CEP162	chr6	84119250	84232643
CEP162_chr6_84119250_84232643	0/0	g0211	1	0	1	0	0	0	CEP162	chr6	84119250	84232643
CEP164_chr11_117322854_117418266	0/0	g0001	4	0	0	4	0	0	CEP164	chr11	117322854	117418266
CEP164_chr11_117322854_117418266	0/0	g0002	4	0	0	4	0	0	CEP164	chr11	117322854	117418266
CEP164_chr11_117322854_117418266	0/0	g0003	3	0	0	3	0	0	CEP164	chr11	117322854	117418266
CEP164_chr11_117322854_117418266	0/0	g0004	2	1	0	0	1	0	CEP164	chr11	117322854	117418266
CEP164_chr11_117322854_117418266	0/0	g0005	2	0	0	2	0	0	CEP164	chr11	117322854	117418266
CEP164_chr11_117322854_117418266	0/0	g0006	2	0	2	0	0	0	CEP164	chr11	117322854	117418266
CEP164_chr11_117322854_117418266	0/0	g0007	2	1	1	0	0	0	CEP164	chr11	117322854	117418266
CEP164_chr11_117322854_117418266	0/0	g0008	2	0	1	1	0	0	CEP164	chr11	117322854	117418266
CEP164_chr11_117322854_117418266	0/0	g0009	2	0	0	2	0	0	CEP164	chr11	117322854	117418266
CEP164_chr11_117322854_117418266	0/0	g0010	2	2	0	0	0	0	CEP164	chr11	117322854	117418266
CEP164_chr11_117322854_117418266	0/0	g0011	2	0	0	0	0	2	CEP164	chr11	117322854	117418266
CEP164_chr11_117322854_117418266	0/0	g0012	2	0	0	2	0	0	CEP164	chr11	117322854	117418266
CEP164_chr11_117322854_117418266	0/0	g0013	2	0	0	2	0	0	CEP164	chr11	117322854	117418266
CEP164_chr11_117322854_117418266	0/0	g0014	2	0	0	2	0	0	CEP164	chr11	117322854	117418266
CEP164_chr11_117322854_117418266	0/0	g0015	2	2	0	0	0	0	CEP164	chr11	117322854	117418266
CEP164_chr11_117322854_117418266	0/0	g0016	2	2	0	0	0	0	CEP164	chr11	117322854	117418266
CEP164_chr11_117322854_117418266	0/0	g0017	2	0	2	0	0	0	CEP164	chr11	117322854	117418266
CEP164_chr11_117322854_117418266	0/0	g0018	2	0	1	0	1	0	CEP164	chr11	117322854	117418266
CEP164_chr11_117322854_117418266	0/0	g0019	2	0	0	2	0	0	CEP164	chr11	117322854	117418266
CEP164_chr11_117322854_117418266	0/0	g0020	2	0	0	2	0	0	CEP164	chr11	117322854	117418266
CEP164_chr11_117322854_117418266	0/0	g0021	1	1	0	0	0	0	CEP164	chr11	117322854	117418266
CEP164_chr11_117322854_117418266	0/0	g0022	1	0	0	0	0	1	CEP164	chr11	117322854	117418266
CEP164_chr11_117322854_117418266	0/0	g0023	1	0	0	0	1	0	CEP164	chr11	117322854	117418266
CEP164_chr11_117322854_117418266	0/0	g0024	1	0	1	0	0	0	CEP164	chr11	117322854	117418266
CEP164_chr11_117322854_117418266	0/0	g0025	1	0	0	0	1	0	CEP164	chr11	117322854	117418266
CEP164_chr11_117322854_117418266	0/0	g0026	1	0	0	0	1	0	CEP164	chr11	117322854	117418266
CEP164_chr11_117322854_117418266	0/0	g0027	1	0	0	1	0	0	CEP164	chr11	117322854	117418266
CEP164_chr11_117322854_117418266	0/0	g0028	1	1	0	0	0	0	CEP164	chr11	117322854	117418266
CEP164_chr11_117322854_117418266	0/0	g0029	1	0	0	1	0	0	CEP164	chr11	117322854	117418266
CEP164_chr11_117322854_117418266	0/0	g0030	1	0	0	0	0	1	CEP164	chr11	117322854	117418266
CEP164_chr11_117322854_117418266	0/0	g0031	1	0	0	0	0	1	CEP164	chr11	117322854	117418266
CEP164_chr11_117322854_117418266	0/0	g0032	1	0	0	0	0	1	CEP164	chr11	117322854	117418266
CEP164_chr11_117322854_117418266	0/0	g0033	1	0	0	0	0	1	CEP164	chr11	117322854	117418266