JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ADAM23_chr2_206438532_206626127	0/0	g0331	1	0	0	1	0	0	ADAM23	chr2	206438532	206626127
ADAM23_chr2_206438532_206626127	0/0	g0332	1	0	0	1	0	0	ADAM23	chr2	206438532	206626127
ADAM23_chr2_206438532_206626127	0/0	g0333	1	0	1	0	0	0	ADAM23	chr2	206438532	206626127
ADAM23_chr2_206438532_206626127	0/0	g0334	1	0	0	1	0	0	ADAM23	chr2	206438532	206626127
ADAM23_chr2_206438532_206626127	0/0	g0335	1	1	0	0	0	0	ADAM23	chr2	206438532	206626127
ADAM23_chr2_206438532_206626127	0/0	g0336	1	1	0	0	0	0	ADAM23	chr2	206438532	206626127
ADAM23_chr2_206438532_206626127	0/0	g0337	1	1	0	0	0	0	ADAM23	chr2	206438532	206626127
ADAM23_chr2_206438532_206626127	0/0	g0338	1	1	0	0	0	0	ADAM23	chr2	206438532	206626127
ADAM23_chr2_206438532_206626127	0/0	g0339	1	1	0	0	0	0	ADAM23	chr2	206438532	206626127
ADAM23_chr2_206438532_206626127	0/0	g0340	1	0	1	0	0	0	ADAM23	chr2	206438532	206626127
ADAM23_chr2_206438532_206626127	0/0	g0341	1	1	0	0	0	0	ADAM23	chr2	206438532	206626127
ADAM23_chr2_206438532_206626127	0/0	g0342	1	1	0	0	0	0	ADAM23	chr2	206438532	206626127
ADAM23_chr2_206438532_206626127	1/0	g0343	1	0	0	0	0	0	ADAM23	chr2	206438532	206626127
ADAM23_chr2_206438532_206626127	0/0	g0344	1	1	0	0	0	0	ADAM23	chr2	206438532	206626127
ADAM23_chr2_206438532_206626127	0/0	g0345	1	0	0	0	0	1	ADAM23	chr2	206438532	206626127
ADAM23_chr2_206438532_206626127	0/0	g0346	1	1	0	0	0	0	ADAM23	chr2	206438532	206626127
ADAM23_chr2_206438532_206626127	0/0	g0347	1	0	1	0	0	0	ADAM23	chr2	206438532	206626127
ADAM23_chr2_206438532_206626127	0/0	g0348	1	0	1	0	0	0	ADAM23	chr2	206438532	206626127
ADAM23_chr2_206438532_206626127	0/0	g0349	1	0	1	0	0	0	ADAM23	chr2	206438532	206626127
ADAM23_chr2_206438532_206626127	0/0	g0350	1	0	0	0	0	1	ADAM23	chr2	206438532	206626127
ADAM23_chr2_206438532_206626127	0/0	g0351	1	0	0	0	0	1	ADAM23	chr2	206438532	206626127
ADAM23_chr2_206438532_206626127	0/0	g0352	1	0	0	0	0	1	ADAM23	chr2	206438532	206626127
ADAM28_chr8_24289069_24364014	0/0	g0001	4	0	0	4	0	0	ADAM28	chr8	24289069	24364014
ADAM28_chr8_24289069_24364014	0/0	g0002	3	0	0	3	0	0	ADAM28	chr8	24289069	24364014
ADAM28_chr8_24289069_24364014	0/0	g0003	3	0	2	1	0	0	ADAM28	chr8	24289069	24364014
ADAM28_chr8_24289069_24364014	0/0	g0004	2	0	2	0	0	0	ADAM28	chr8	24289069	24364014
ADAM28_chr8_24289069_24364014	0/0	g0005	2	2	0	0	0	0	ADAM28	chr8	24289069	24364014
ADAM28_chr8_24289069_24364014	0/0	g0006	2	0	0	2	0	0	ADAM28	chr8	24289069	24364014
ADAM28_chr8_24289069_24364014	0/0	g0007	2	0	0	2	0	0	ADAM28	chr8	24289069	24364014
ADAM28_chr8_24289069_24364014	0/0	g0008	2	0	2	0	0	0	ADAM28	chr8	24289069	24364014
ADAM28_chr8_24289069_24364014	0/0	g0009	2	0	0	2	0	0	ADAM28	chr8	24289069	24364014
ADAM28_chr8_24289069_24364014	0/0	g0010	2	2	0	0	0	0	ADAM28	chr8	24289069	24364014
ADAM28_chr8_24289069_24364014	0/0	g0011	2	0	1	1	0	0	ADAM28	chr8	24289069	24364014
ADAM28_chr8_24289069_24364014	0/0	g0012	2	0	1	1	0	0	ADAM28	chr8	24289069	24364014
ADAM28_chr8_24289069_24364014	0/0	g0013	2	0	0	2	0	0	ADAM28	chr8	24289069	24364014
ADAM28_chr8_24289069_24364014	0/0	g0014	2	0	0	0	0	2	ADAM28	chr8	24289069	24364014
ADAM28_chr8_24289069_24364014	0/0	g0015	2	0	2	0	0	0	ADAM28	chr8	24289069	24364014
ADAM28_chr8_24289069_24364014	0/0	g0016	2	0	0	2	0	0	ADAM28	chr8	24289069	24364014
ADAM28_chr8_24289069_24364014	0/0	g0017	1	0	1	0	0	0	ADAM28	chr8	24289069	24364014
ADAM28_chr8_24289069_24364014	0/0	g0018	1	1	0	0	0	0	ADAM28	chr8	24289069	24364014
ADAM28_chr8_24289069_24364014	0/0	g0019	1	1	0	0	0	0	ADAM28	chr8	24289069	24364014
ADAM28_chr8_24289069_24364014	0/0	g0020	1	0	1	0	0	0	ADAM28	chr8	24289069	24364014
ADAM28_chr8_24289069_24364014	0/0	g0021	1	0	0	1	0	0	ADAM28	chr8	24289069	24364014
ADAM28_chr8_24289069_24364014	0/0	g0022	1	0	1	0	0	0	ADAM28	chr8	24289069	24364014
ADAM28_chr8_24289069_24364014	0/0	g0023	1	0	0	0	1	0	ADAM28	chr8	24289069	24364014
ADAM28_chr8_24289069_24364014	0/0	g0024	1	0	0	0	0	1	ADAM28	chr8	24289069	24364014
ADAM28_chr8_24289069_24364014	0/0	g0025	1	0	0	0	0	1	ADAM28	chr8	24289069	24364014
ADAM28_chr8_24289069_24364014	0/0	g0026	1	0	0	1	0	0	ADAM28	chr8	24289069	24364014
ADAM28_chr8_24289069_24364014	0/0	g0027	1	0	0	1	0	0	ADAM28	chr8	24289069	24364014
ADAM28_chr8_24289069_24364014	0/0	g0028	1	1	0	0	0	0	ADAM28	chr8	24289069	24364014