JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
CEP63_chr3_134481057_134570031	0/0	g0299	1	0	0	1	0	0	CEP63	chr3	134481057	134570031
CEP63_chr3_134481057_134570031	0/0	g0300	1	0	0	0	0	1	CEP63	chr3	134481057	134570031
CEP63_chr3_134481057_134570031	0/0	g0301	1	0	0	0	0	1	CEP63	chr3	134481057	134570031
CEP63_chr3_134481057_134570031	0/0	g0302	1	0	0	0	0	1	CEP63	chr3	134481057	134570031
CEP63_chr3_134481057_134570031	0/0	g0303	1	0	0	1	0	0	CEP63	chr3	134481057	134570031
CEP63_chr3_134481057_134570031	0/0	g0304	1	0	0	1	0	0	CEP63	chr3	134481057	134570031
CEP63_chr3_134481057_134570031	0/0	g0305	1	0	0	0	1	0	CEP63	chr3	134481057	134570031
CEP63_chr3_134481057_134570031	0/0	g0306	1	0	1	0	0	0	CEP63	chr3	134481057	134570031
CEP63_chr3_134481057_134570031	0/0	g0307	1	0	1	0	0	0	CEP63	chr3	134481057	134570031
CEP63_chr3_134481057_134570031	0/0	g0308	1	0	0	1	0	0	CEP63	chr3	134481057	134570031
CEP63_chr3_134481057_134570031	0/0	g0309	1	1	0	0	0	0	CEP63	chr3	134481057	134570031
CEP63_chr3_134481057_134570031	0/0	g0310	1	1	0	0	0	0	CEP63	chr3	134481057	134570031
CEP63_chr3_134481057_134570031	0/0	g0311	1	0	1	0	0	0	CEP63	chr3	134481057	134570031
CEP63_chr3_134481057_134570031	0/0	g0312	1	1	0	0	0	0	CEP63	chr3	134481057	134570031
CEP68_chr2_65051416_65092004	0/0	g0001	15	0	1	14	0	0	CEP68	chr2	65051416	65092004
CEP68_chr2_65051416_65092004	0/0	g0002	13	0	2	10	0	1	CEP68	chr2	65051416	65092004
CEP68_chr2_65051416_65092004	0/0	g0003	9	0	5	3	0	1	CEP68	chr2	65051416	65092004
CEP68_chr2_65051416_65092004	0/1	g0004	9	0	1	3	0	4	CEP68	chr2	65051416	65092004
CEP68_chr2_65051416_65092004	0/0	g0005	8	0	2	6	0	0	CEP68	chr2	65051416	65092004
CEP68_chr2_65051416_65092004	0/0	g0006	6	5	1	0	0	0	CEP68	chr2	65051416	65092004
CEP68_chr2_65051416_65092004	0/0	g0007	5	5	0	0	0	0	CEP68	chr2	65051416	65092004
CEP68_chr2_65051416_65092004	0/0	g0008	5	0	2	2	0	1	CEP68	chr2	65051416	65092004
CEP68_chr2_65051416_65092004	0/0	g0009	4	1	3	0	0	0	CEP68	chr2	65051416	65092004
CEP68_chr2_65051416_65092004	0/0	g0010	4	0	0	4	0	0	CEP68	chr2	65051416	65092004
CEP68_chr2_65051416_65092004	0/0	g0011	3	0	0	3	0	0	CEP68	chr2	65051416	65092004
CEP68_chr2_65051416_65092004	0/0	g0012	3	2	1	0	0	0	CEP68	chr2	65051416	65092004
CEP68_chr2_65051416_65092004	0/0	g0013	3	3	0	0	0	0	CEP68	chr2	65051416	65092004
CEP68_chr2_65051416_65092004	0/0	g0014	3	3	0	0	0	0	CEP68	chr2	65051416	65092004
CEP68_chr2_65051416_65092004	0/0	g0015	3	0	3	0	0	0	CEP68	chr2	65051416	65092004
CEP68_chr2_65051416_65092004	0/0	g0016	3	3	0	0	0	0	CEP68	chr2	65051416	65092004
CEP68_chr2_65051416_65092004	0/0	g0017	3	0	0	3	0	0	CEP68	chr2	65051416	65092004
CEP68_chr2_65051416_65092004	0/0	g0018	3	0	0	3	0	0	CEP68	chr2	65051416	65092004
CEP68_chr2_65051416_65092004	0/0	g0019	2	2	0	0	0	0	CEP68	chr2	65051416	65092004
CEP68_chr2_65051416_65092004	0/0	g0020	2	2	0	0	0	0	CEP68	chr2	65051416	65092004
CEP68_chr2_65051416_65092004	0/0	g0021	2	0	0	2	0	0	CEP68	chr2	65051416	65092004
CEP68_chr2_65051416_65092004	0/0	g0022	2	0	0	2	0	0	CEP68	chr2	65051416	65092004
CEP68_chr2_65051416_65092004	0/0	g0023	2	0	0	2	0	0	CEP68	chr2	65051416	65092004
CEP68_chr2_65051416_65092004	0/0	g0024	2	0	2	0	0	0	CEP68	chr2	65051416	65092004
CEP68_chr2_65051416_65092004	0/0	g0025	2	0	0	0	2	0	CEP68	chr2	65051416	65092004
CEP68_chr2_65051416_65092004	0/0	g0026	2	0	1	1	0	0	CEP68	chr2	65051416	65092004
CEP68_chr2_65051416_65092004	0/0	g0027	2	0	0	1	0	1	CEP68	chr2	65051416	65092004
CEP68_chr2_65051416_65092004	0/0	g0028	2	0	0	2	0	0	CEP68	chr2	65051416	65092004
CEP68_chr2_65051416_65092004	0/0	g0029	2	2	0	0	0	0	CEP68	chr2	65051416	65092004
CEP68_chr2_65051416_65092004	0/0	g0030	2	2	0	0	0	0	CEP68	chr2	65051416	65092004
CEP68_chr2_65051416_65092004	0/0	g0031	2	0	1	0	1	0	CEP68	chr2	65051416	65092004
CEP68_chr2_65051416_65092004	0/0	g0032	2	0	1	0	0	1	CEP68	chr2	65051416	65092004
CEP68_chr2_65051416_65092004	0/0	g0033	2	0	0	0	0	2	CEP68	chr2	65051416	65092004
CEP68_chr2_65051416_65092004	0/0	g0034	2	0	0	0	0	2	CEP68	chr2	65051416	65092004
CEP68_chr2_65051416_65092004	0/0	g0035	2	0	1	0	0	1	CEP68	chr2	65051416	65092004
CEP68_chr2_65051416_65092004	0/0	g0036	2	2	0	0	0	0	CEP68	chr2	65051416	65092004